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Help->About menu of the
MetamorphoSysGUI.AboutAction.
ConceptView interface.ExpandedForm providing
equals, hashCode, toString,
and compareTo methods to any descendents.Finder interface.AbstractFinder.
MetamorphoSysGUI.AdvancedOptionsGUI to configure the
UserConfiguration.
ConceptInputStream.
ConceptOutputStream.
Filters to enable or
disable.
SemanticTypesToRemoveOptionsGUI.
Filters to import.
UserConfiguration to a file.
Restrictor to
the chain so that it will be applied.
Restrictor to the
chain and uses it for the sort order.
HashMap of ancillary files.
Atom.
Atom.
Atom.
Atom.
Atom.
AtomMapping.
AtomMapping.
AtomAttribute.
Attribute.
AtomAttribute.
Attribute.
AtomAttribute.
Attribute.
RelationshipAttribute.
AtomAttribute.
RelationshipAttribute.
AttributeContext.
AttributeContext.
AttType to the data structure that holds
the list of attribute types to be excluded.
AttributeValue.
AttributeValue.
HashMap of change files.
ComponentHistory.
ComponentHistory.
ComponentHistory.
Concept for display in the current view.
ConceptMapping.
ConceptMapping.
ConceptView to the ReportsManager.
Container to the list of Containers whose
font size will be managed.
Context.
Context.
Context.
Context.
Context.
Context.
Context.
ContextMember.
ContextMember.
ContextMember.
ContextMember.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
CoocurrenceContext.
CoocurrenceContext.
CutandPasteModeListener.
DataChangeListener that responds to configuration changes.
DataChangeListener that responds to configuration changes.
DataChangeListener that responds to configuration changes.
DataChangeListener that responds to configuration changes.
DataChangeListener that responds to configuration changes.
DataChangeListener that will be notified every time a
OriginalMRMetamorphoSysInputStream.fireDataChanged() call is made.
DataChangeListener that will be notified every time a
OriginalMRMetamorphoSysOutputStream.fireDataChanged() call is made.
DataChangeListener that will be notified every time a
RichMRMetamorphoSysInputStream.fireDataChanged() call is made.
DataChangeListener that will be notified every time a
RichMRMetamorphoSysOutputStream.fireDataChanged() call is made.
Definition.
Definition.
Definition.
Definition.
Definition.
Definition.
Definition.
Finder to the FinderManager.
CutandPasteModeListener.
Color to be associated with the given
content view id.
AdditionalRelationshipLabel.
Language to the data structure that holds
the list of languages to be excluded.
Locator.
Locator.
Locator.
Locator.
Locator.
Locator.
Locator.
Mapping.
Mapping.
Mapping.
MetaDescription.
MetaDescription.
ProgressListener.
Properties for a given Configurable.
QualifierFrequency.
QualifierFrequency.
Relationship.
Relationship.
Relationship.
Relationship.
Relationship.
Relationship.
Relationship.
RelType to the data structure that holds
the list of relationship types to be excluded.
SourceTermType to the list of removable termgroups.
SourceTermType on that row to the list of
removable SourceTermTypes.
Source will be included
in the list of sources from which contexts will be built.
Source to the data structure that holds the list
of selected sources.
SemanticType.
SemanticType.
SemanticType.
HierarchicalSemanticType to the data structure that holds
the list of semantic_types to be excluded.
Source on that row to the list of
Sources.
Color to be associated with the given
Source.
SourceContext.
SourceContext.
SourceMetaDescription.
SourceMetaDescription.
Source.
Source to the full list.
StringAttribute.
StringAttribute.
StringContext.
StringContext.
Color to be associated with the given
HierarchicalSemanticType.
HierarchicalSemanticType.
SourceTermType to the list of suppressible termgroups.
SourceTermType on that row to the list
of suppressible SourceTermTypes.
GUIConfigurable to the GUI.
TableSortListener.
TermAttribute.
TermAttribute.
Container.
Options->MetamorphoSys Options
menu.
AdvancedOptionsGUI from the specified
UserConfiguration.
Atoms sui
or lui should be added to the ambiguous maps.
Atoms sui
or lui should be added to the ambiguous maps.
ApplicationConfiguration from the specified
properties file.
ApplicationConfiguration from the specified
Properties.
Concept, but does not remove any data
from the concept.
Concept, but does not remove any data
from the concept.
Concept, but does not remove any data
from the concept.
Concept or its components
from the release.
Concept.
Concept or its components will
be removed from the release.
true if the given archive File
contains the given directory.
Concept.Restrictor that restricts by Language.Atom.AtomAttribute interface.AtomAttribute.
AtomAttribute.
Atoms.Coocurrence
interface.AtomCoocurrence.
AtomCoocurrence from the specified AtomCoocurrence.
Concept or Atom retrieval, to specify
how much information should be kept.AtomDataSelector.
Atom.Restrictor that restricts by Language.Restrictor that restricts by Source.Atom
interface.Atom.
Atom from the specified Atom.
Atom
identifiers.AtomMapping
interface.AtomMapping.
AtomMapping from the specified AtomMapping.
Atoms.Relationship
interface.AtomRelationship.
AtomRelationship from the specified AtomRelationship.
Atom, a Concept, or a Relationship.Source and code
within a StringAttribute.AttributeContext
interface.AttributeContext.
AttributeContext from the specified AttributeContext.
Attribute interface.Attribute.
Attribute.
AttributeName.
AttributeContext.AttributeValue
interface.AttributeValue.
AttributeValue from the specified AttributeValue.
AttType.
AttType.
BackwardAction with the specified
ConceptListManager.
SubsetListener that the Initialize Cui List phase is starting.
SubsetListener that the Initialize Cui List phase is
starting.
SubsetListener that the Initialize Cui List phase is
starting.
SubsetListener that the Initialize Cui List phase is
starting.
SubsetListener that the Initialize Cui List phase is
starting.
BeginSubsetAction.
SubsetListener that the Subset Content phase is starting.
SubsetListener that the Subset Content phase is starting.
SubsetListener that the Subset Content phase is starting.
SubsetListener that the Subset Content phase is starting.
SubsetListener that the Subset Content phase is starting.
Icon that depicts an arrow used on a column header to indicate
if sorting is ascending or descending.BevelArrowIcon from the specified parameters.
BevelArrowIcon is inappropriate.BlankIcon.
BlankIcon using the color and size specified
Concepts.BrowserRestrictor options.BrowserRestrictorOptionsGUI and builds the frame.
BrowserState already exists.
BrowsableInputStream.
RRFBrowsableInputStream.
BrowsableInputStream need to be built.
RRFBrowsableInputStream need to be
built.
Frame.
CoocurrenceContext
interface.ChainRestrictor.
MetamorphoSysInputStream on the gui.
MetamorphoSysOutputStream on the gui.
DefaultHandler API.
Character class does not have a
valueOf(String) method,
this method takes its place in reconstructing primitive values.
ChecksumValidator.
ChecksumValidator.
Finders.
ConceptViews.
CuiSuiAuiList
can be garbage collected.
Concept's components.
Concept's components.
PlaceholderConcept's components.
AtomMappings.
AtomMappings.
Atoms.
Atoms.
Atoms.
Atoms.
Atoms.
AttributeContexts.
AttributeContexts.
AtomAttributes.
Attributes.
AtomAttributes.
Attributes.
AtomAttributes.
Attributes.
RelationshipAttributes.
AtomAttributes.
RelationshipAttributes.
AttributeValues.
AttributeValues.
ComponentHistorys.
ComponentHistorys.
ComponentHistorys.
ConceptMappings.
ConceptMappings.
SourceTermTypes that have been confirmed by the
user to be removable.
SourceTermTypes that have been confirmed
by the user to be suppressible.
ContextMembers.
ContextMembers.
ContextMembers.
ContextMembers.
Contexts.
Contexts.
Contexts.
Contexts.
Contexts.
Contexts.
Contexts.
CoocurrenceContexts.
CoocurrenceContexts.
Coocurrences.
Coocurrences.
Coocurrences.
Coocurrences.
Coocurrences.
Coocurrences.
Coocurrences.
Definitions.
Definitions.
Definitions.
Definitions.
Definitions.
Definitions.
Definitions.
Locators.
Locators.
Locators.
Locators.
Locators.
Locators.
Locators.
Mappings.
Mappings.
Mappings.
MetaDescriptions.
MetaDescriptions.
MMSProgressMonitor.
Configurable.
QualifierFrequencys.
QualifierFrequencys.
Relationships.
Relationships.
Relationships.
Relationships.
Relationships.
Relationships.
Relationships.
SourceTermTypes.
SemanticTypes.
SemanticTypes.
SemanticTypes.
SourceContexts.
SourceContexts.
Dependency(s).
SourceMetaDescriptions.
SourceMetaDescriptions.
StringAttributes.
StringAttributes.
StringContexts.
StringContexts.
SourceTermTypes.
TermAttributes.
TermAttributes.
BrowsableInputStream.
RRFBrowsableInputStream.
RichMRMetamorphoSysInputStream.open(String[]).
OriginalMRFilesConceptInputStream.open(String[]).
OriginalMRFilesConceptOutputStream.open(String).
OriginalMRMetathesaurusInputStream.open(String[]).
RichMRFilesConceptInputStream.open(String[]).
RichMRMetathesaurusInputStream.open(String[]).
SearchStringPushBackReader.
MultiplePathReader.
Finder that directly looks up concepts by CODE values.CodeSearchFinder.
BackwardAction.
ForwardAction.
ColumnStatistics.
Language of each AtomElement object.
Language of each AtomElement object.
Source of each AtomElement object.
String object.
String object.
String object.
Source of each SourceElement object.
String object.
DisplayableConcepts for order.
Dependency to another one.
AttType with a parameter
Object based on the source abbreviation.
RelType with a parameter
Object based on the source abbreviation.
Object with this ExpandedForm.
HierarchicalSemanticType to another one.
AtomAttribute to another one.
AtomCoocurrence to another one.
AtomMapping to another one.
Relationship to another one.
AttributeContext to another one.
Attribute to another one.
AttributeValue to another one.
ComponentHistory to another one.
ConceptMapping to another one.
ContextGroup to another one.
Source to another one.
ContextMember to another one.
Source to another one.
CoocurrenceGroup to another one.
Coocurrence to another one.
Definition to another one.
IndexEntry to another one.
Locator to another one.
MapObject with the specified object for order.
Mapping to another one.
MetaDescription to another one.
Atom to another one.
Concept to another one.
QualifierFrequency to another one.
RelationshipAttribute to another one.
Relationship to another one.
ReleaseMetadata with the specified object for order.
SemanticType to another one.
Atom to another one.
SourceContext to another one.
SourceMetaDescription to another one.
StringAttribute to another one.
StringContext to another one.
StringInfo to another one.
STYMetaDescription to another one.
TermAttribute to another one.
Term to another one.
Source to another one.
SourceTermType to another one.
ComponentHistory.ComponentHistory.
ComponentHistory from the
specified ComponentHistory.
Concepts based on cui.Concepts based on String order.Concepts from the subset.Concept or Atom retrieval, to specify
how much information should be kept.Concept.Concept interface.Concept.
Concept from the specified Concept.
Concepts from some input source.ConceptListManager.
Concept, but does not remove any components
from the Concept.Concept
identifiers.ConceptMapping
interface.ConceptMapping.
ConceptMapping from the specified ConceptMapping.
Concepts out.Concept objects.ConceptQueue with the specified size.
Concepts should be kept for the subset or removed from
the subset.MetamorphoSys application.ConfigureSubsetProgressMonitor and initializes it.
BrowsableInputStream
contains the concept specified by the CUI.
RRFBrowsableInputStream
contains the concept specified by the CUI.
String has
any extended unicode characters in it.
ConceptElement.ContentView.
ContentView from the specified String value.
ContentView from the specified long value.
BrowserRestrictor is required to have a no-arg constructor.
ContentViewFilter, but
provides color and style selections and deselections based on
the selections and deselections of the content views.ContentViewFilter.
ContentViewFilter.ContentViewOption
Atom, including
the relevant tree-numbers and the various ancestors, children, and siblings.StringContexts all of which
share the same string identifier.ContextGroup
interface.ContextGroup.
ContextGroup from the specified ContextGroup.
Context interface.Context.
Context from the specified Context.
ContextMember
interface.ContextMember.
ContextMember from the specified ContextMember.
Atoms) or meanings
(Concepts) in a source of biomedical literature.CoocurrenceGroup, containing more
detailed information about how two co ocurring meanings (or identifiers)
are related in a particular source of biomedical literature.CoocurrenceContext
interface.CoocurrenceContext.
CoocurrenceContext from the specified CoocurrenceContext.
Concepts or Atoms.CoocurrenceGroup
interface.CoocurrenceGroup.
CoocurrenceGroup from the specified CoocurrenceGroup.
Coocurrence
interface.Coocurrence.
Coocurrence from the specified Coocurrence.
CoocurrenceType.
InputStream to a new directory
with a given file name.
File->Copy DVD Image to Hard Drive menu of
the WelcomeGUI.CopyToHardDriveAction.
Context in the appropriate index files and returns
the count of Contexts whose ptr matches the given one + the aui.
Context.
Context in the appropriate index files and returns
the count of Contexts whose ptr matches the given one.
Context.
FieldedStringTokenizer.nextToken()
method can be called before it generates an exception.
MetamorphoSys
subsetting, in which a list of cuis to be kept is built up.Finder that directly looks up concepts by CUI values.CuiSearchFinder.
MetamorphoSys
subsetting, in which a list of cuis to be kept is built up.CuiSuiAuiList
JTable that supports cut-and-paste and drag-and-drop
operations for reordering rows.CutandPasteDNDTable from the specified model.
CutandPasteDNDTable without a model.
CutandPasteDNDTable.CutandPasteDNDTable.CutandPasteModeEvent from the specified source.
CutandPasteDNDTable.DataChangeEvent specified source object.
Date classes do not have a valueOf(String) method,
this method takes its place in reconstructing primitive values.
Action used to decrease the font in a window.DecreaseFontAction.
SearchOptions.setMaxResults(int).
DefaultSubset.
DefaultSubset.DefaultSubsetSelectionGUI from the specified
configuration objects.
Atom.Definition
interface.Definition.
Definition from the specified Definition.
BrowserStates in the config directory
except for the given one.
Dependency.
Dependency between
the two specified Sources.
BrowsableInputStream contains the
expected data for its type.
RRFBrowsableInputStream contains RRF data.
Concept to support a configurable display name.DisplayableConcept from the specified
Concept
DisplayableConcept from the specified
Concept
WelcomeGUI.
WelcomeGUI.
WelcomeGUI.
List from given list of source candidates.
PlainDocument implementation that only accepts floating point
numerical values.DoubleDocument.
CuiSuiAuiList for debugging purposes.
EnableFilterAction.
EnableFilterRedoHandler for the specified gui.
EnableFilterUndoHandler for the specified gui.
String
so the resulting string can be safely used in a document without a CDATA
section.
DefaultHandler API.
SubsetListener that the Initialize Cui List phase is ending.
SubsetListener that the Initialize Cui List phase is
ending.
SubsetListener that the Initialize Cui List phase is
ending.
SubsetListener that the Initialize Cui List phase is
ending.
SubsetListener that the Initialize Cui List phase is
ending.
SubsetListener that the Subset Content phase is ending.
SubsetListener that the Subset Content phase is ending.
SubsetListener that the Subset Content phase is ending.
SubsetListener that the Subset Content phase is ending.
SubsetListener that the Subset Content phase is ending.
BrowserRestrictor.
true if the specified object is
equal to this object.
AttType.
RelType.
Object with this ExpandedForm
for equality.
Comparator is
a Concept.ByCUIComparator
Comparator is
a Concept.ByPreferredNameComparator
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is equal to this object.
true if the specified object is
equal to this object.
true if the specified object is equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
true if the specified object is
equal to this object.
Map of the word frequency counts within strings.
KeyEvents so that they don't have any effect on the
window that has the GlassComponent enabled.
System.exit(int).
ExitAction
ExitMRCXTAction
ExitRRFAction
JFrame and returns to the WelcomeGUI.
ConceptView that displays the concept report with a formatted
appearance that is customizable by the user.ExpandableConceptView.
JPopupMenuConceptView that displays the concept report with a formatted
appearance that is customizable by the user.ExpandableRawView.
JPopupMenuConceptView.FieldedStringTokenizer for the specified string.
FileStatistics
FileStatistics
information based on some kind of configuration.FilterEnableDialog.
JEditorPane
for the given search_term.
Atom that contains the given aui.
Atom[] of Atoms that have the given code and that are in
any of the given Sources.
Atom[] of Atoms that have the given code and that are in
any of the given Sources.
Context's ptr + aui in the appropriate
index files and returns the Contexts with matching ptrs.
Context[] of children for the given context.
Concept that contains the given aui.
Concept associated with the given cui.
Concepts that match search words, with results filtered by
WordSearchFinder.Options.
Document shown in a
JEditorPane.FindDialog.
Concepts.Finders.FinderManager.
Context's ptr in the appropriate
index files and returns the Contexts with matching ptrs.
Context[] of siblings for the given context.
WordSearchResults of Concepts with Strings
containing the specified word.
WordSearchResults of Concepts with Strings
containing the specified word.
ProgressEvent.
SourcesToRemoveEvent to inform all listening filters to
respond to the change in the sources to remove list.
SourcesToRemoveEvent to inform all listening filters to
respond to the change in the sources to exclude list.
PrecedenceFilter
so as not to leave the filter when a cut has not yet been
pasted.
PrecedenceFilter
so as not to leave the filter when a cut has not yet been
pasted.
Fonts in a Container.Reader.
Reader.
Concept from the queue, blocks if the queue is empty afterwards.
IndexEntry from the queue, blocks if the queue is empty afterwards.
List of active Filters.
AdditionalRelationshipLabel for the specified abbreviation.
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabels.
AdditionalRelationshipLabels as a List.
AdditionalRelationshipLabels are to be retrieved on
the Contexts, Mappings, or Relationships of the
Concept.
AdditionalRelationshipLabels are to be retrieved on
the Contexts, Mappings, or Relationships of the
Concept.
ColumnStatistics for the file.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
ContextMembers that have the context
member label (CXL) of "ANC" or self.
Reader for the given ancillary file.
Reader over the specified ancillary file.
String[] of all the ancillary file names.
String[] of all the ancillary file names.
MMSYS/config/timestamp.dat.
ApplicationConfiguration.
ApplicationConfiguration.
MMSYS/config/version.dat.
AttributeName (ATN).
AttributeName (ATN).
AttributeImpl.getAttributeName().
AttributeValueImpl.getAttributeName().
SourceMetaDescriptionImpl.getAttributeNamesAsString().
Atom to which this element is connected.
Atom for this AttributeContext.
Atom this AtomAttribute is connected to.
Atom this AtomCoocurrence is connected to.
Atom this Relationship is connected to.
Atom for this AttributeContext.
Atom this Context is connected to.
Atom this CoocurrenceGroup is connected to.
Atom related to this Definition.
Atom related to this Locator.
Atom this Relationship is connected to.
Atom this SourceContext is connected to.
Atom for this StringContext.
Atom.
Atom.
AtomMappings.
AtomMappings.
AtomMappings as a List.
AtomMappings as a List.
Atoms from the MRCON
and MRSO files with the
given cui and adds them to the current Concept.
Atoms from the MRCONSO.RRF file matching the
specified CUI and adds them to the current Concept.
Atoms.
Concept's Atoms.
Atoms.
Concept's Atoms.
Atoms.
Concept's Atoms.
Atoms.
Atoms.
Atoms as a List.
Atoms as a List.
Atoms as a List.
Atoms as a List.
Atoms as a List.
ConceptDataSelector containing only atoms.
AttributeContexts.
AttributeContexts.
AttributeContexts as a List.
AttributeContexts as a List.
AttributeName (ATN).
AttributeName for the specified abbreviation.
AttributeName (ATN).
AttributeName (ATN).
AttributeName (ATN).
AttributeName (MAPATN).
AttributeName (MAPATN).
AttributeNames.
AttributeNames for this SourceMetaDescription.
AttributeNames for this Source.
AttributeNames for this Source.
AttributeNames as a List.
AttributeNames as a List.
AttributeNames as a List.
AttributeNames as a List.
AttributeNames are to be retrieved on the
Mappings or Attributes of the Concept.
AttributeNames are to be retrieved on the
Mappings or Attributes of the Concept.
Attributes from the MRSAT files with the
given cui and adds them to the current Concept
Attributes from the MRSAT.RRF files with the
given cui and adds them to the current Concept.
AtomAttributes.
Attributes.
AtomAttributes.
Attributes.
AtomAttributes.
Attributes.
RelationshipAttributes.
Relationship's RelationshipAttributes.
AtomAttributes.
RelationshipAttributes.
Relationship's RelationshipAttributes.
AtomAttributes as a List.
Attributes as a List.
AtomAttributes as a List.
Attributes as a List.
AtomAttributes as a List.
Attributes as a List.
RelationshipAttributes as a List.
AtomAttributes as a List.
RelationshipAttributes as a List.
Atom.
Atom.
Atom.
Atom
in a List.
Atom
in a List.
Atom
in a List.
Relationship.
Relationship.
Relationship.
Relationship
in a List.
Relationship
in a List.
Relationship
in a List.
AttTypes with sources to be
excluded that are therefore not displayed in the attribute type table.
List containing all attribute types.
List containing all
AttTypes that share the same source.
Set containing all
AttTypes that share the same Source.
List containing all
AttributeTypes to be excluded.
AttributeValues.
AttributeValues.
AttributeValues as a List.
AttributeValues as a List.
DefinitionImpl.getAttributeIdentifier().
LocatorImpl.getAttributeIdentifier().
SemanticTypeImpl.getAttributeIdentifier().
AttributeImpl.getAttributeValue().
AttributeValueImpl.getAttributeValue().
Atom.getAtomIdentifier().
PlaceholderAtom.getAtomIdentifier().
SmallPlaceholderAtom.getAtomIdentifier().
AtomMappingImpl.getAtomIdentifier().
AtomMappingImpl.getRelatedAtomIdentifier().
AttributeTypesToRemoveListSelectionListener
and indicates whether the automatic selection option on the MetamorphoSys Options
dialog box has been chosen.
Stack of Concepts populated
only with cuis.
BrowsableInputStream.
BrowserRestrictor.
BrowserRestrictor initialized with the
properties saved in the BrowserState.
BrowserRestrictorOptionsGUI.
BrowserState.
BrowserState.
release.dat.
SourceMetaDescriptionImpl.getCharacterEncoding().
SourceMetaDescriptionImpl.getConceptFrequency()
Reader for the given CHANGE file.
Reader for the given CHANGE file.
String[] of all the file names in the CHANGE directory.
String[] of all the file names in the CHANGE directory.
JCheckBox for this ContentViewOption.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
ContextMembers that have the context
member label (CXL) of "CHD" or child.
JFileChooser.
JFileChooser.
ExpandableConceptView.
CoocurrenceImpl.getCoocurrenceAttribute().
CoocurrenceContextImpl.getCoocurrenceContextFrequency().
CoocurrenceImpl.getCoocurrenceFrequency().
Color that should be used to display
the name.
List of Colors for which the given parameter
matches in the BrowserRestrictor's key.
List of Colors for which the given parameter
matches in the BrowserRestrictor's key.
List of Colors for which the given parameter
matches in the BrowserRestrictor's key.
List of Colors for which the given parameter
matches in the BrowserRestrictor's key.
List of Colors for which the given parameter
matches in the BrowserRestrictor's key.
Color that should be used to display
the name.
Color that should be used to display
the name.
Color that should be used to display
the name.
Color that should be used to display
the name.
Color that should be used to display the name.
Color that should be used to display
the name.
Color that should be used to display the name.
Color that should be used to display
the name.
Color that should be used to display
the name.
Color that should be used to display the name.
Color that should be used to display the name.
Color that should be used to display the name.
Color that should be used to display the name.
Color associated with the given
content view id.
Color associated with the given
Source.
Color associated with the given
HierarchicalSemanticType.
Class of the Objects in column with index
column_number.
Class of the Objects in column column_number.
Class of the objects in the given column.
MRCOLS.RRF lines for the specified FileStatistics.
MRCOLS.RRF lines for the specified FileStatistics.
Component for the specified Filter.
Component for the specified Filter.
Component for the specified Filter.
ComponentHistorys from the MRHIST.RRF file with the
given cui and adds them to the current Concept.
ComponentHistorys.
ComponentHistorys.
ComponentHistorys.
ComponentHistorys as a List.
ComponentHistorys as a List.
ComponentHistorys as a List.
Concept from a set of
Rich Release files.
Concept that holds this ConceptElement.
Concept that holds this Attribute.
Concept that holds this ComponentHistory.
Concept that holds this ContextGroup.
Concept that holds this Context
Concept that holds this CoocurrenceGroup.
Concept that holds this Coocurrence.
Concept that holds this Definition.
Concept that holds this Locator.
Concept that holds this Mapping (CUI).
Concept that holds this Atom.
Concept that holds this Relationship.
Concept that holds this SemanticType.
Concept that holds this Atom.
Concept that holds this TermAttribute.
Concept that holds this Term.
List of active ConceptContentSelectors.
ConceptDataSelector.
ConceptDataSelector.
Concept.
Concept
that holds this Concept.
String representation of the CUI.
Concept
that holds this Concept.
String representation of the CUI.
ConceptList.
ConceptList associated with the given
directory.
ConceptListManager.
List of active ConceptManipulators.
ConceptMappings.
ConceptMappings.
ConceptMappings as a List.
ConceptMappings as a List.
int between 0 and 100 indicating
how far along the input stream is in reading Concepts.
int between 0 and 100 indicating
how far along the input stream is in reading Concepts.
Concepts that have been processed so far.
MRCON lines that have been processed.
MRCONSO lines that have been processed.
List of active ConceptSelectors.
Set of the ConceptViews.
Concept from a set of
Rich Release files.
Concept from a set of
Rich Release files.
ApplicationConfiguration.
String detailing
the user selections on the filter.
String detailing
the user selections on the GUIConfigurable.
String detailing
the user selections on the GUIConfigurable.
String detailing
the user selections on the GUIConfigurable.
String describing the configuration details.
String describing the configuration details.
String detailing
the user selections on the filter.
Filter.
mmsys.log.
mmsys.log.
mmsys.log.
SourceTermTypes that have been confirmed by the
user via a dialog box to be removable.
SourceTermTypes that have been
confirmed by the user via a dialog box to be suppressible.
JEditorPane display.
JEditorPane display.
JEditorPane display.
JEditorPane display.
ContentView definition for this ConceptElement (CVF).
ContentView definition for this Attribute (CVF).
ContentView definition for this AttributeValue (CVF).
ContentView definition for this Locator (CVF).
ContentView definition for this Context (CVF).
ContentView definition for this CoocurrenceContext (CVF).
ContentView definition for this Coocurrence (CVF).
ContentView definition for this Definition (CVF).
ContentView definition for this Locator (CVF).
ContentView definition for this Mapping (CVF).
ContentView definition for this Atom (CVF).
ContentView definition for this Relationship (CVF).
ContentView definition for this SemanticType (CVF).
ContentView definition for this Atom (CVF).
ContentView definition for this SourceContext (CVF).
ContextGroup that holds this StringContext.
ContextGroup that holds this StringContext.
ContextGroups.
ContextGroups.
ContextGroups.
ContextGroups as a List.
ContextGroups as a List.
ContextGroups as a List.
ContextMembers.
ContextMembers.
ContextMembers.
ContextMembers.
ContextMembers as a List.
ContextMembers as a List.
ContextMembers.
ContextMembers.
Contexts from the MRCXT files with the
given cui and adds them to the current Concept.
Contexts from the MRCXT.RRF and
MRHIER.RRF files with the
given cui and adds them to this_concept.
Contexts.
Contexts.
Concept's Contexts.
Contexts.
Contexts.
Concept's Contexts.
Contexts.
Contexts.
Concept's Contexts.
Contexts.
Contexts as a List.
Contexts as a List.
Contexts as a List.
Contexts as a List.
Contexts as a List.
Contexts as a List.
Contexts as a List.
CoocurrenceContexts.
CoocurrenceContexts .
CoocurrenceContexts as a List.
CoocurrenceContexts as a List.
CoocurrenceGroup that holds this CoocurrenceContext.
CoocurrenceGroup that holds this CoocurrenceContext.
CoocurrenceGroups.
CoocurrenceGroups.
CoocurrenceGroups.
CoocurrenceGroups as a List.
CoocurrenceGroups as a List.
CoocurrenceGroups as a List.
Coocurrences from the MRCOC file with the
given cui and adds them to the current Concept.
Coocurrences from the MRCOC.RRF file with the
given cui and adds them to the current Concept.
Coocurrences.
Coocurrences.
Concept's Coocurrences.
Coocurrences.
Coocurrences.
Concept's Coocurrences.
Coocurrences.
Coocurrences.
Concept's Coocurrences.
Coocurrences.
Coocurrences as a List.
Coocurrences as a List.
Coocurrences as a List.
Coocurrences as a List.
Coocurrences as a List.
Coocurrences as a List.
Coocurrences as a List.
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceType for the specified abbreviation.
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceTypes.
List of all CoocurrenceTypes.
CoocurrenceTypes are to be used to select
Coocurrences of the Concept to retrieve.
CoocurrenceTypes are to be used to select
Coocurrences of the Concept to retrieve.
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceContextImpl.getCoocurrenceType().
CoocurrenceImpl.getCoocurrenceType().
Concept.
ConceptImpl.getConceptIdentifier().
String representation of the CUI.
PlaceholderConcept.getConceptIdentifier().
String representation of the CUI.
ConceptMappingImpl.getConceptIdentifier().
ConceptMappingImpl.getRelativeConceptIdentifier().
BrowserState
Concept.
Concept currently being viewed.
Finder that is currently being
displayed on the JTabbedPane.
Sources with CURVER = "N".
Sources with CURVER = "N"
as a List.
ConceptView that is currently being
displayed on the JTabbedPane.
ContentView definition for this ConceptElement (CVF).
AttributeImpl.getContentView().
AttributeValueImpl.getContentView().
ComponentHistoryImpl.getContentView().
ContextImpl.getContentView().
CoocurrenceContextImpl.getContentView().
CoocurrenceImpl.getContentView().
DefinitionImpl.getContentView().
LocatorImpl.getContentView().
MappingImpl.getContentView().
PlaceholderAtom.getContentView().
RelationshipImpl.getContentView().
SemanticTypeImpl.getContentView().
SmallPlaceholderAtom.getContentView().
SourceContextImpl.getContentView().
ContextMember (CXL).
ContextMemberImpl.getLabel().
ContextImpl.getContextNumber()
SourceContextImpl.getContextNumber()
SourceMetaDescriptionImpl.getContextType().
DefinitionImpl.getDefinition().
STYMetaDescriptionImpl.getDefinition().
List containing all SourceTermTypes to be
removed from the default termgroup list.
List of all Sources to be excluded.
Set containing the default list of all
Sources to be excluded.
DefaultSubsets.
DefaultSubsets as a List.
List containing all
SourceTermTypes to be suppressed from the default termgroup list.
Definitions from the MRDEF file with the
given cui and adds them to the current Concept.
Definitions from the MRDEF.RRF file with the
given cui and adds them to the current Concept.
Definitions.
Definitions.
Concept's Definitions.
Definitions.
Definitions.
Concept's Definitions.
Definitions.
Definitions.
Concept's Definitions.
Definitions.
Definitions as a List.
Definitions as a List.
Definitions as a List.
Definitions as a List.
Definitions as a List.
Definitions as a List.
Definitions as a List.
Source.
Source.
Source.
DefaultSubset.
BrowsableInputStream.
RRFBrowsableInputStream.
ConceptLists.
Document.
SuperJEditorPane which holds HTML.
STYMetaDescriptionImpl.getExamplesAsString().
String array of of Metathesaurus strings (EX)
which are examples of this semantic type.
String array of of Metathesaurus strings (EX)
which are examples of this semantic type.
String array of of Metathesaurus strings (EX)
which are examples of this semantic type.
List array of of Metathesaurus strings (EX)
which are examples of this semantic type.
List array of of Metathesaurus strings (EX)
which are examples of this semantic type.
List array of of Metathesaurus strings (EX)
which are examples of this semantic type.
ExpansionState.
FileStatistics object for the specified file name.
FileStatistics object for the specified file name.
FileStatistics object containing
ColumnStatistics objects describing the
specified file.
MRFILES.RRF line for the specified FileStatistics.
MRFILES line.
MRFILES.RRF line for the specified FileStatistics.
FindDialog
FinderHandler that will
execute the find operation for this ConceptView
FinderHandler that will execute the find operation
for this ConceptView
FinderHandler that will execute the find operation
for this ConceptView
FinderManager.
Set of Finders.
Stack of Concepts populated
only with cuis.
LocatorImpl.getFrequency().
MapObject.
MapObject.
MRCXTBuilderGUI.
MetamorphoSysGUI.
GUIConfigurable whose tab should next be displayed
to allow the user to correct an error or warning.
GUIConfigurable whose tab should next be displayed
to allow the user to correct an error or warning.
GUIConfigurable whose tab should next be displayed
to allow the user to correct an error or warning.
GUIConfigurable whose tab should next be displayed
to allow the user to correct an error or warning.
GUIConfigurable whose tab should next be displayed to
allow the user to correct an error or warning.
GUIConfigurable whose tab should next be displayed to
allow the user to correct an error or warning.
GUIConfigurable whose tab should next be displayed to
allow the user to correct an error or warning.
ContextImpl.getHierarchicalCode().
ContextMemberImpl.getHierarchicalCode().
JPanel that will be displayed when the
user selects the corresponding menu item from the Help menu
and will provide the user with detailed instructions on the tab's use.
JPanel that will be displayed when the
user selects the corresponding menu item from the Help menu
and will provide the user with detailed instructions on the tab's use.
JPanel that will be added to the main GUI
help menu to allow the user to consult a help window
that is particular to this filter.
JPanel that will be called from
the help menu to allow the user to reference a help window
that is particular to this filter.
JPanel that will be added to the main GUI
help menu to allow the user to consult a help window
that is particular to this filter.
JPanel that will be added to the main GUI
help menu to allow the user to consult a help window
that is particular to this filter.
JPanel that will be added to the main GUI
help menu to allow the user to consult a help window
that is particular to this filter.
JPanel.
JPanel.
JPanel that will be added to the main GUI help
menu to allow the user to consult a help window that is particular to this
filter.
JPanel.
JPanel that will be displayed when the
user selects the corresponding menu item from the Help menu
and will provide the user with detailed instructions on the tab's use.
JPanel that will be displayed when the user selects the
corresponding menu item from the Help menu and will provide the user with
detailed instructions on the tab's use.
JPanel that will be displayed when the user selects the
corresponding menu item from the Help menu and will provide the user with
detailed instructions on the tab's use.
JPanel that will be displayed when the user selects the
corresponding menu item from the Help menu and will provide the user with
detailed instructions on the tab's use.
JPanel that will be displayed when the user selects the
corresponding menu item from the Help menu and will provide the user with
detailed instructions on the tab's use.
Color in hexidecimal format.
HierarchicalSemanticType for the specified semantic type name.
HierarchicalSemanticTypes.
HierarchicalSemanticTypes.
DefaultSubset.
SourceMetaDescriptionImpl.getInsertMetaVersion()
ConceptDataSelector containing all Concept data.
List of Sources that have been selected to be
included in MRCXT.RRF.
int between 0 and 100 indicating
how far along the input stream is in reading IndexEntry
elements.
int between 0 and 100 indicating
how far along the input stream is in reading IndexEntry
elements.
IndexEntry objects that have been processed.
ConceptInputStream selected by the user.
InstallConfiguration.
.jar files in the CLASSPATH
and returns all fully qualified class names that implement
the specified interface.
.jar files in the CLASSPATH
and returns all fully qualified class names that implement
the specified interface.
AdditionalRelationshipLabel that is the inverse of the
specified AdditionalRelationshipLabel.
RelationshipLabel that is the inverse of the
specified RelationshipLabel.
Atom
is preferred (ISPREF).
Atom is
preferred (ISPREF).
Atom is
preferred (ISPREF).
Object key for a specified index.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used by equals, compareTo, and
hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used by equals, compareTo, and
hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used by equals, compareTo, and
hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
String key which can be used
by equals, compareTo, and hashCode methods.
ContextMember (CXL).
ContextMember (CXL).
Language of the index that will be searched.
Language (LAT).
String representation of the language.
Language (LAT).
Language (LAT).
Language (LAT).
Language (LAT).
String representation of the language.
Language for the specified abbreviation.
Language (LAT).
Language (LAT).
Language (LAT).
Languages.
Languages as a List.
Languages are to used to select which Atoms
of the Concept are to be retrieved.
List containing all
languages to be excluded.
XTabbedPane index of pane dragged.
XTabbedPane index of where pane was dropped.
Language (LAT).
String representation of the language.
PlaceholderAtom.getLanguage().
SmallPlaceholderAtom.getLanguage().
SourceMetaDescriptionImpl.getLanguage().
TermImpl.getLanguage().
String representation of the language.
Language (LAT).
Language (LAT).
Language (LAT).
File that contains the lexicon
data.
MRFILES to determine the size of MRCON.
MRFILES to determine the size of the index files.
MRFILES.RRF to determine the size
of MRCONSO.RRF.
MRFILES.RRF to determine the size of the index files.
Locators from the MRLO file with the
given cui and adds them to the current Concept.
Locators.
Locators.
Locators.
Locators.
Locators.
Locators.
Locators.
Locators as a List.
Locators as a List.
Locators as a List.
Locators as a List.
Locators as a List.
Locators as a List.
Locators as a List.
BufferedWriter log.
String that is being indexed.
String representation of the LUI.
PlaceholderAtom.getTermIdentifier().
SmallPlaceholderAtom.getTermIdentifier().
TermAttributeImpl.getTermIdentifier().
TermImpl.getTermIdentifier().
String representation of the LUI.
release.dat.
Mappings from the MRATX file with the
given cui and adds them to the current Concept.
Mappings from the MRMAP.RRF file with the
given cui and adds them to the current Concept.
Mappings.
Mappings.
Mappings.
Mappings as a List.
Mappings as a List.
Mappings as a List.
AtomMapping (MAPREASON).
ConceptMapping (MAPREASON).
AtomMapping (MAPREASON).
ConceptMapping (MAPREASON).
SourceMetaDescriptionImpl.getValidEndDate().
MetaDescriptions in the current subset.
MetaDescriptions in the current subset.
MetaDescription in the current subset as a List.
MetaDescription in the current subset as a List.
File for the MetamorphoSys "config" directory
to use.
File that contains the MetamorphoSys
application.
MetamorphoSysInputStream.
File that contains the Metathesaurus
data.
MRCXTBuilder
SourceMetaDescriptionImpl.getValidStartDate().
Colors.
DefaultSubset.
Filter.
String that is being indexed.
String that is being indexed.
Stack.
Object representation for the given row which
is found in the given file.
Object representation for the given row which
is found in the given file.
List of old style filters.
ConceptOutputStream selected by the user.
JPanel containing configuration options.
JPanel containing configuration options.
JPanel containing configuration options.
JPanel containing configuration options.
JPanel containing the concept report.
JPanel containing the concept report.
JPanel with a JTabbedPane
displaying all of the FinderManager's Finders.
JPanel with a JTabbedPane
displaying all of the ReportsManager's ConceptViews.
JPanel containing configuration options.
JPanel containing configuration options.
JPanel containing a JTree that enables navigation
through the context hierarchy.
JPanel containing configuration options.
JPanel containing configuration options.
JPanel displaying the contents of the specified url
URL.
String[]
of AUI values.
String[]
of AUI values.
String[]
of AUI values.
String[]
of AUI values.
List of AUI values.
List of AUI values.
List of AUI values.
List of AUI values.
ContextImpl.getParentAtomIdentifier().
SourceContextImpl.getParentAtomIdentifier().
ArrayList ranking
the SourceTermTypes according to precedence.
List of all SourceTermType objects in the
precedence order.
SourceTermTypes
Atom[].
Atom[].
String.
Printable that handles printing.
Printable that handles printing.
Printable that handles printing.
MMSProgressMonitor.
Properties representing the configuration choices.
Properties representing the configuration choices.
Properties for the given Configurable.
ConceptView.
Properties representing the configuration choices.
ConceptView.
ConceptView.
Properties representing the configuration choices.
Properties representing the configuration choices.
Finder.
Finder.
Properties representing the configuration choices.
MRCXTBuilder as a Properties
object.
Properties object with the configuration.
Properties specific to the filter.
Properties object.
Properties
object.
Properties
object.
Properties
object.
Properties
object.
Properties corresponding to the specified
Configurable.
Properties.
GUIConfigurable-specific property value.
ContextImpl.getPathToRootAsString().
SourceContextImpl.getPathToRootAsString().
QualifierFrequency values as a List.
QualifierFrequency values as a List.
QualifierFrequency values as a List.
QualifierFrequency values as a List.
QualifierFrequency list.
QualifierFrequency list.
QualifierFrequency list.
QualifierFrequency list.
Map that has concept data filename
String objects as keys and have String[] values
which are the lines in the file matching the specified CUI.
Map that has concept data RRF filename
String objects as keys and have String[] values
which are the lines in the file matching the specified CUI.
Map that has history filename
String objects as keys and have String[] values
which are the lines of the file that are relevant to the query.
Map that has history filename
String objects as keys and have String[] values
which are the lines of the file that provide historical information for the
specified CUI.
Map that has metadata filename String
objects as keys and have String[] values which are the lines
of the file that are relevant to the query.
Map that has metadata filename
String objects as keys and have String[] values
which are the lines of the file that are relevant to the query.
SourceMetaDescriptionImpl.getRootConceptIdentifier().
ConceptMapping.
ConceptMapping.
Locator
in the actual information source.
Locator
in the actual information source.
AtomMappingImpl.getRelationshipLabel().
ConceptMappingImpl.getRelationship().
MappingImpl.getRelationshipName().
RelationshipImpl.getRelationshipLabel().
RelationshipLabel (REL).
RelationshipLabel (REL).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AtomMappingImpl.getAdditionalRelationshipLabel()).
ConceptMappingImpl.getAdditionalRelationshipLabel()).
ContextImpl.getAdditionalRelationshipLabel().
ContextMemberImpl.getAdditionalRelationshipLabel().
MappingImpl.getAdditionalRelationshipLabel().
RelationshipImpl.getAdditionalRelationshipLabel().
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
Atom involved.
Atom to which this element is related.
Concept to which this element is related.
SourceIdentifierType to which this element is connected.
SourceIdentifierType to which this element is connected.
Relationship this RelationshipAttribute is connected to.
Relationship to which this element is connected.
Relationship.
Relationship.
RelationshipLabel (REL).
RelationshipLabel (REL).
RelationshipLabel for the specified abbreviation.
RelationshipLabels.
RelationshipLabels as a List.
RelationshipLabels are used to select
Mappings or Relationships of the Concept to be
retrieved.
RelationshipLabels are used to select
Mappings or Relationships of the Concept to be
retrieved.
RelationshipLabel (REL).
RelationshipLabel (REL).
Relationships from the MRREL file with the
given cui and adds them to the current Concept
Relationships from the MRREL.RRF file with the
given cui and adds them to the current Concept.
Relationships.
Atom's Relationships.
Relationships.
Concept's Relationships.
Relationships.
Atom's Relationships.
Relationships.
Concept's Relationships.
Relationships.
Atom's Relationships.
Relationships.
Concept's Relationships.
Relationships.
Atom's Relationships.
Relationships as a List.
Relationships as a List.
Relationships as a List.
Relationships as a List.
Relationships as a List.
Relationships as a List.
Relationships as a List.
RelTypes with sources to be
excluded that are therefore not displayed in the attribute type table.
List containing all RelTypes.
List containing all
RelTypes that share the same Source.
List containing all
RelTypes to be excluded.
release.dat.
String indicating the release date corresponding to the
configuration file being used.
Date.
Date.
release.dat.
String indicating the release description corresponding
to the configuration file being used.
release.dat.
String indicating the release version corresponding to
the configuration file being used.
Set containing all
RelTypes that share the same Source.
List containing all removable SourceTermTypes.
SourceTermTypes with the removable
termgroups highlighted.
ConceptDataSelector with all data removed.
ReportsManager.
JMenuItem for a "Help" menu that opens a browser with
the specified URL.
RelationshipImpl.getRelationshipGroup().
SourceMetaDescriptionImpl.getRemoveMetaVersion()
AttTypes with sources to be
excluded that are therefore not displayed in the attribute type table.
RelTypes with sources to be
excluded that are therefore not displayed in the relationship type table.
HierarchicalSemanticType is located.
HierarchicalSemanticType in the
Semantic Types To Exclude Table.
Source
Source is located.
Source in the Sources To Remove
Table.
PrecedenceFilter's precedence array for the
given SourceTermType.
SourceTermType to a row number in the table.
SourceTermType to a row number in the table.
RRFBrowserGUI.
RRFBrowserGUI.
SourceMetaDescriptionImpl.getRootSourceAbbreviation().
RelationshipImpl.getRelationshipIdentifier().
Relationship.getRelationshipIdentifier().
AttributeImpl.getSourceAttributeIdentifier().
AttributeValueImpl.getSourceAttributeIdentifier().
DefinitionImpl.getSourceAttributeIdentifier().
LocatorImpl.getSourceAttributeIdentifier().
Atom.
PlaceholderAtom.getSourceAtomIdentifier().
SmallPlaceholderAtom.getSourceAtomIdentifier().
SourceMetaDescriptionImpl.getContentContact().
SourceMetaDescriptionImpl.getCitation().
PlaceholderAtom.getSourceConceptIdentifier().
SmallPlaceholderAtom.getSourceConceptIdentifier().
PlaceholderAtom.getSourceDescriptor().
SmallPlaceholderAtom.getSourceDescriptor().
DefaultSubset selected by the user.
DefaultSubset.
List containing all Sources
selected.
Set containing all Sources
selected.
List of Sources that are not
selected.
Set of Sources that are not
selected.
Strings.
ContextMember that has the context
member label (CXL) of "CCP" or self.
ContextMember that has the context
member label (CXL) of "CCP" or self.
ContextMembers that have the context
member label (CXL) of "CCP" or self.
ContextMembers that have the context
member label (CXL) of "CCP" or self.
ContextMembers that have the context
member label (CXL) of "CCP" or self.
ContextMembers that have the context
member label (CXL) of "CCP" or self.
File that contains the semantic network
data.
HierarchicalSemanticType (STY).
HierarchicalSemanticType (STY).
HierarchicalSemanticType object at the given row
number.
HierarchicalSemanticType at a given row in the Semantic
Types To Exclude Table.
HierarchicalSemanticTypes that are children of
a specified tree number.
HierarchicalSemanticTypes that are children of
a specified tree number.
SemanticTypeGroup for the specified abbreviation.
SemanticTypeGroups for which the given SemanticType
is a member.
SemanticTypeGroups.
SemanticTypeGroups for which the given SemanticType is
a member as a List.
SemanticTypeGroups as a List.
SemanticTypes from the MRSTY file with the
given cui and adds them to the current Concept.
SemanticTypes from the MRSTY.RRF file with the
given cui and adds them to the current Concept.
SemanticTypes.
SemanticTypes.
SemanticTypes.
SemanticTypes in this SemanticTypeGroup.
SemanticTypes as a List.
SemanticTypes as a List.
SemanticTypes as a List.
SemanticTypes in this SemanticTypeGroup as a List.
List containing all
HierarchicalSemanticTypes to be excluded.
SourceMetaDescriptionImpl.getSourceFamily().
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
ContextMembers that have the context
member label (CXL) of "SIB" or self.
RelationshipImpl.getSourceOfLabel().
SourceMetaDescriptionImpl.getLicenseContact().
LocatorImpl.getExternalName().
SourceMetaDescriptionImpl.getOfficialName().
DisplayableConcept.
LocatorImpl.getRecordIdentifier().
Locator
in the actual information source.
Source object being depended upon.
Source in this
RelType.
AttributeContext.
Attribute.
ComponentHistory.
Context.
CoocurrenceContext.
Coocurrence.
Definition.
Locator.
MapObject.
Source.
Atom.
Relationship.
Atom.
StringContext.
Source for the specified versioned source abbreviation.
SourceElement.
Source.
Atom.
Atom.
Atom.
Source at the given row number.
Source at a given row in the Sources To Remove Table.
SourceContexts.
SourceContexts.
SourceContexts as a List.
SourceContexts as a List.
List of Dependency(s).
Set of Dependency(s).
File where the MRHIER.RRF will be found and the
MRCXT.RRF should be written.
SourceIdentifierType for this AttributeContext.
SourceIdentifierType for this AttributeContext.
SourceIdentifierType to which this element is connected.
SourceIdentifierType to which this element is connected.
SourceIdentifierType to which this element is connected.
SourceIdentifierType for the specified abbreviation.
SourceIdentifierTypes.
SourceIdentifierTypes as a List.
Sources
List of included sources.
SourceMetaDescriptions in the current subset.
SourceMetaDescriptions in the current subset.
SourceMetaDescription in the current subset as a List.
SourceMetaDescription in the current subset as a List.
Sources from the default configuration.
Sources.
Sources as a List.
Sources from which elements of the Concept are to
be retrieved.
Sources from which elements of the Concept are to
be retrieved.
Sources for a specified source family.
Sources for a specified source family.
SourcesToRemoveListener
to determine which sources should be removed from the other Filter's
displays.
List of sources to remove.
JTable that displays the list of sources.
SourceTermType for the specified source abbreviation
and term type.
SourceTermTypes in rank order.
SourceTermTypes in rank order.
SourceTermTypes in rank order as a List.
SourceTermTypes in rank order as a List.
List of all SourceTermType objects.
List containing all SourceTermTypes.
List containing all SourceTermTypes
that share the same Source.
SourceMetaDescriptionImpl.getRestrictionLevel().
RelationshipImpl.getSourceRelationshipIdentifier().
SourceMetaDescriptionImpl.getShortName().
STYMetaDescriptionImpl.getTreeNumber().
PlaceholderAtom.getName().
SmallPlaceholderAtom.getName().
StringInfoImpl.getName().
TermImpl.getName().
StringAttribute that holds this AttributeContext.
StringAttribute that holds this AttributeContext.
StringAttributes.
StringAttributes.
StringAttributes as a List.
StringAttributes as a List.
StringContext that holds this SourceContext.
StringContext that holds this SourceContext.
StringContexts.
StringContexts.
StringContexts as a List
StringContexts as a List
StringInfo.
StringInfo.
StringInfo.
StringInfo.
StringType (STT).
StringType (STT).
StringType (STT).
StringType (STT).
StringType (STT).
StringType for the specified abbreviation.
StringTypes.
StringTypes as a List.
StringType (STT).
PlaceholderAtom.getStringType().
SmallPlaceholderAtom.getStringType().
StringInfoImpl.getStringType().
StringType (STT).
SemanticTypeImpl.getSemanticType()
STYMetaDescriptionImpl.getName().
HierarchicalSemanticType (STY).
HierarchicalSemanticType with the given
String representation.
List of font styles for which the given parameter
matches in the BrowserRestrictor's key.
List of font styles for which the given parameter
matches in the BrowserRestrictor's key.
List of font styles for which the given parameter
matches in the BrowserRestrictor's key.
List of font styles for which the given parameter
matches in the BrowserRestrictor's key.
List of font styles for which the given parameter
matches in the BrowserRestrictor's key.
Source.
HierarchicalSemanticType.
MappingImpl.getSubsetIdentifier().
String representation of the SUI.
LocatorImpl.getStringIdentifier().
PlaceholderAtom.getStringIdentifier().
SmallPlaceholderAtom.getStringIdentifier().
StringInfoImpl.getStringIdentifier().
String representation of the SUI.
Suppressible for the specified abbreviation.
Suppressibles.
Suppressibles as a List.
Suppressibles are used to select Atoms,
Attributes, Definitions, or Relationships of the
Concept to be retrieved.
Suppressibles are used to select Atoms,
Attributes, Definitions, or Relationships of the
Concept to be retrieved.
List containing all
suppressible SourceTermTypes.
SourceTermTypes
with the suppressible termgroups highlighted.
ComponentHistoryImpl.getVersion().
SourceMetaDescriptionImpl.getVersion().
BrowserRestrictorOptionsGUI.
JButton that holds the text and BevelArrowIcon.
Term.
Term.
Term to which this element is connected.
TermAttribute that holds this StringAttribute.
TermAttribute that holds this StringAttribute.
TermAttributes.
TermAttributes.
TermAttributes.
TermAttributes.
TermAttributes.
TermAttributes as a List.
TermAttributes as a List.
TermAttributes as a List.
TermAttributes as a List.
TermAttributes as a List.
SourceTermType.
SourceTermType.
Terms.
Terms.
Terms.
Terms as a List.
Terms as a List.
Terms as a List.
TermStatus (TS).
TermStatus (TS).
TermStatus (TS).
TermStatus (TS).
TermStatus (TS).
TermStatus for the specified abbreviation.
TermStatus values.
TermStatus values.
TermType (TTY).
TermType (TTY).
TermType (TTY).
TermType.
TermType for the specified abbreviation.
TermTypeGroup for the specified abbreviation.
TermTypeGroups for which the given TermType
is a member.
TermTypeGroups.
TermTypeGroups for which the given TermType is
a member as a List.
TermTypeGroups as a List.
TermTypeGroups and therefore which TermTypes
are to be used to select Atoms of the Concept to retrieve.
TermTypes.
TermTypes.
TermTypes.
TermTypes.
TermTypes in this TermTypeGroup.
TermTypes as a List.
TermTypes as a List.
TermTypes as a List.
TermTypes as a List.
TermTypes in this TermTypeGroup as a List.
TermTypes are used to select Atoms of the
Concept to retrieve.
StringInfo term variants.
StringInfo term variants.
StringInfo term variants as a List.
StringInfo term variants as a List.
SourceMetaDescriptionImpl.getTermFrequency()
MapObject.
MapObject.
TermStatus (TS).
PlaceholderAtom.getTermStatus().
SmallPlaceholderAtom.getTermStatus().
TermImpl.getTermStatus().
TermStatus (TS).
TermType (TTY).
PlaceholderAtom.getTermType().
SmallPlaceholderAtom.getTermType().
SourceMetaDescriptionImpl.getTermTypesAsString().
RelType.
SourceIdentifierType (FROMTYPE or TOTYPE).
SourceIdentifierType (FROMTYPE or TOTYPE).
ComponentHistoryImpl.getIdentifier().
STYMetaDescriptionImpl.getIdentifier().
File directory that contains the Metathesaurus
data.
LocatorImpl.getFrequencyMeaning().
STYMetaDescriptionImpl.getUsageNote().
JMenuItem for a "Help" menu that opens a browser with
the specified URL.
UserConfiguration.
UserConfiguration.
List of user suppressed SourceTermType objects.
List of valid Filters.
String that is being indexed.
String that is being indexed.
Object value for a specified index.
SourceMetaDescriptionImpl.getVersionedConceptIdentifier().
ConceptMappingImpl.getLastReleaseVersion().
String[] of warnings accumulated during
processing of the input stream.
String[] of warnings accumulated during
processing of the Filter.
String[] of warnings accumulated during
processing of the input stream.
String[] of warnings accumulated during
processing of the output stream.
String[] of warnings accumulated during
processing of the input stream.
String[] of warnings accumulated during
processing of the output stream.
String[] of warnings accumulated during
processing of the input stream.
String[] of warnings accumulated during
processing of the output stream.
WelcomeGUI.
InputStream for the ZipEntry in
the specified ZipFile.
GlassComponent with the specified root component.
MetamorphoSysGUI.GUIConfigurableRedoHandler.
GUIConfigurableUndoHandler.
Context has children.
Source has a dependent source.
FieldedStringTokenizer.hasMoreTokens() method.
Atom is the preferred atom identifier
for its Concept and string identifier.
Atom is the preferred atom identifier
for its Concept and string identifier.
Atom is the preferred atom identifier
for its Concept and string identifier.
Atom is the preferred atom identifier
for its Concept and string identifier.
PlaceholderAtom.hasPreferredAtomIdentifier().
SmallPlaceholderAtom.hasPreferredAtomIdentifier().
Term
of the Concept.
PlaceholderAtom.hasPreferredTermIdentifier()
SmallPlaceholderAtom.hasPreferredTermIdentifier()
TermImpl.hasPreferredTermIdentifier()
Term is the preferred Term
of the Concept.
Term it is part of.
Term it is part of.
Term it is part of.
Term it is part of.
PlaceholderAtom.hasPreferredStringIdentifier().
SmallPlaceholderAtom.hasPreferredStringIdentifier().
StringInfoImpl.hasPreferredStringIdentifier().
Term it is part of.
Term
of the Concept.
Concept.
Concept.
Term is the preferred Term
of the Concept.
Term is the preferred Term
of the Concept.
Context has siblings.
HierarchicalSemanticType.
HTMLDocumentRenderer.
HtmlViewer.
PlainDocument implementation that prevents leading, training,
duplicate, and redundant whitespace.IdealWhitespaceDocument.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
boolean to indicate whether or not
ListSelectionEvents are to be ignored.
/ext directory Used for
the File->Import Filter menu of MetamorphoSysGUI.ImportFilterAction.
Action used to decrease the font in a window.IncreaseFontAction.
AtomMapping is in the current subset (MAPIN).
ConceptMapping is in the current subset (MAPIN).
AtomMapping is in the current subset (MAPIN).
ConceptMapping is in the current subset (MAPIN).
IndexBuilder.
IndexBuilder.
IndexEntry interface.IndexEntry.
IndexEntry from the specified IndexEntry.
IndexEntry objects.IndexEntryQueue with the specified size.
JCheckBox for this ContentViewOption.
Map used to track all of the
AdditionalRelationshipLabels that exist at one time.
Map used to track all of the
AdditionalRelationshipLabels that exist at one time.
Map used to track all of the
AttributeNames that exist at one time.
Map used to track all of the
AttributeNames that exist at one time.
Map used to track all of the
CoocurrenceTypes that exist at one time.
Map used to track all of the
CoocurrenceTypes that exist at one time.
Map used to track all of the
HierarchicalSemanticTypes that exist at one time.
Map used to track all of the
HierarchicalSemanticTypes that exist at one time.
Map used to track all of the
Languages that exist at one time.
Map used to track all of the
Languages that exist at one time.
MetaDescriptions at one time.
STYMetaDescriptions at one time.
SourceMetaDescriptions at one time.
Map used to track all of the
RelationshipLabels that exist at one time.
Map used to track all of the
RelationshipLabels that exist at one time.
Map used to track all of the
SemanticTypeGroups that exist at one time.
Map used to track all of the
SemanticTypeGroups that exist at one time.
Map used to track all of the
Sources that exist at one time.
Map used to track all of the Sources that
exist at one time.
Map used to track all of the
SourceIdentifierTypes that exist at one time.
Map used to track all of the
SourceIdentifierTypes that exist at one time.
Map used to track all of the
StringTypes that exist at one time.
Map used to track all of the
StringTypes that exist at one time.
Map used to track all of the
Suppressibles that exist at one time.
Map used to track all of the
Suppressibles that exist at one time.
Map used to track all of the
TermStatuses that exist at one time.
Map used to track all of the
TermStatuses that exist at one time.
Map used to track all of the
TermTypes that exist at one time.
Map used to track all of the
TermTypes that exist at one time.
Map used to track all of the
TermTypeGroups that exist at one time.
Map used to track all of the
TermTypeGroups that exist at one time.
GUIConfigurable.
true if any part of the Concept being kept.
true if the cui,sui,aui combination is being kept.
true if any part of the Concept is being kept.
true if the cui,sui,aui combination is being kept.
FileStatistics from an InputStream having
structured lines like a config/mrpluscolsfiles.dat file.InputStreamFileStatisticsConfiguration from the
specified InputStream.
InputStreamRedoHandler.
InputStreamUndoHandler.
PlainDocument.insertString(int,String,AttributeSet) to
allow only double precision floating point values.
PlainDocument.insertString(int,String,AttributeSet) to
disallow:
leading whitespace
trailing whitespace
any non-space character whitespace
duplicate spaces
PlainDocument.insertString(int,String,AttributeSet) to
allow only int values.
InstallationGUI.
InstallationGUI.
InstallationProgressMonitor and initializes it.
MetamorphoSysGUI is instantiated.PlainDocument implementation that only accepts integer values.IntegerDocument.
AdditionalRelationshipLabels of the Contexts,
Mappings, or Relationships of the Concept.
AdditionalRelationshipLabels of the Contexts,
Mappings, or Relationships of the Concept.
AttributeNames of the
Mappings or Attributes of the Concept.
AttributeNames of the
Mappings or Attributes of the Concept.
CoocurrenceTypes to select
Coocurrences of the Concept to retrieve.
CoocurrenceTypes to select
Coocurrences of the Concept to retrieve.
Languages when selecting
Atoms of the Concept to retrieve.
RelationshipLabels to select
Mappings or Relationships of the Concept to
retrieve.
RelationshipLabels to select
Mappings or Relationships of the Concept to
retrieve.
Concept from
all Sources.
Concept from
all Sources.
Suppressibles to select
Atoms, Attributes, Definitions, or
Relationships of the Concept to retrieve.
Suppressibles to select
Atoms, Attributes, Definitions, or
Relationships of the Concept to retrieve.
TermTypes which belong to a
TermTypeGroup to select Atoms of the Concept to
retrieve.
TermTypes to select
Atoms of the Concept to retrieve.
Relationship.
Relationship.
Atoms of the
Concept.
Attributes of the
Concept.
Attributes of the
Concept.
Color is present in the
set of content view id - Color
associations.
Color is present in the
set of HierarchicalSemanticType - Color
associations.
Color is present in the
set of Source - Color
associations.
ComponentHistorys of the
Concept.
Contexts of the
Concept.
Contexts of the
Concept.
Coocurrences of the
Concept.
Coocurrences of the
Concept.
true if a cut has been completed, false
otherwise
Definitions of the
Concept.
Definitions of the
Concept.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during the
"Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during the
"Initialize Cuis" phase of the subsetting process.
Filter can use the efficient mode during
the "Initialize Cuis" phase of the subsetting process.
Concept is empty, meaning
that either the SemanticType was removed or
all of the Atoms were removed.
Concept is empty, meaning
that either the SemanticType was removed or
all of the Atoms were removed.
ConceptView.
Finders.
Finders.
Color
associations.
WelcomeGUI.
true if the specified LUI is suppressible.
true if the specified LUI is suppressible.
Mappings of the
Concept.
AttributeImpl is obsolete.
AttributeValueImpl is obsolete.
DefinitionImpl is obsolete.
AtomImpl is obsolete.
RelationshipImpl is obsolete.
AtomImpl is obsolete.
SourceTermType is obsolete.
true if output stream should write versioned format.
true if a cut has been completed, false
otherwise
Concepts.
IndexEntrys.
Relationships of the
Concept.
Relationships of the
Concept.
RelType
is on the list of those to be exluded from the subset.
SemanticTypes of the
Concept.
HierarchicalSemanticType
is of the type to be removed.
Source is
present in the set of Source - Color
associations.
Source is
present in the set of Source - style
associations.
SourceTermType is suppressed by the user.
boolean depending on whether or not
the Source is excluded from the subset.
HierarchicalSemanticType is
present in the set of HierarchicalSemanticType - Color
associations.
HierarchicalSemanticType is
present in the set of HierarchicalSemanticType - style
associations.
List of suppressible cui,sui values.
Attribute is suppressible.
AttributeValue is suppressible.
Atom is suppressible.
Atom is suppressible.
Atom is suppressible.
Atom is suppressible.
SourceTermType is suppressible.
JComponentPrintHandler.
JEditorPane.Object should be kept according to
the restriction rules of this BrowserRestrictor
return true if Object should be kept
false otherwise
Object should be kept according to
the restriction rules of this BrowserRestrictor
return true if Object should be kept
false otherwise
Object should be kept according to
the restriction rules of this BrowserRestrictor
return true if Object should be kept
false otherwise
Object should be kept according to
the restriction rules of this BrowserRestrictor
return true if Object should be kept
false otherwise
Object should be kept according to
the restriction rules of this BrowserRestrictor
return true if Object should be kept
false otherwise
Concept should be selected to be kept for the
subset.
Concept should be selected to be kept for the
subset.
Atom should be
kept or not
AtomElement should be
kept or not
AtomElement should be
kept or not
Object should be
kept based on the Restrictors in the chain.
ContentView matches the one passed in.
Object
should be kept or not.
SourceElement should be
kept or not
Language.
LicenseAgreementGUI.
JDialog used to present a user with a list of choices.ListDialog from the specified parameters.
Properties from the specified file.
Properties.
Properties.
LocalException.
LocalException with the specified error message.
Locator interface.Locator.
Locator from the specified Locator.
LowercaseWordIndexEntryImpl interface.LowercaseWordIndexEntryImpl.
LowercaseWordIndexEntryImpl from the specified
LowercaseWordIndexEntryImpl.
MetamorphoSysGUI
tabbed pane.
MRCXTBuilderOutputStream and instructs it
to write the MRCXT.RRF file.
Mapping.MappingImpl.
MapObject from the specified MapObject.
Mapping.MappingImpl.
Mapping from the specified Mapping.
File.
File.
File.
File.
MetaDescription
interface.MetaDescriptionImpl.
MetaDescription.
MetaDescriptionInitializer.
MetamorphoSys object, initializes the
ApplicationConfiguration and UserConfigurations from the
config/mmsys.a.prop and config/mmsys.prop.sav files.
MetamorphoSys object, initializes the
ApplicationConfiguration and UserConfigurations.
MetamorphoSys object.
MetamorphoSys object, initializes the
ApplicationConfiguration and UserConfigurations.
MetamorphoSys subsetting
operation.MetamorphoSysGUI and builds the frame.
MRCXTBuilder and builds the frame.
MRCXTBuilderFileStatisticsConfiguration from the
specified MRCOLS and MRFILES.
MRCXTBuilderGUI and builds the frame.
MRCXTBuilderOutputStream.
MRCXTBuilderSourceListSelectionListener
with the specified MRCXTBuilderGUI and SortableJTable.
JDialog used to request multi-line input from the user.MultiLineInputDialog from the specified parameters.
Map that uses two keys.MultiMap.
MultiplePathReader from the component BufferedReaders.
Map that uses two keys.BrowserRestrictorOptionsGUI.
NewConfigAction.
Coocurrence from a MRCOC.RRF line.
Atom from a MRCONSO.RRF line.
ContextMember from a MRCXT.RRF line.
Definition from a MRDEF.RRF line.
Context from a MRHIER.RRF line.
ComponentHistory from a MRHIST.RRF line.
Mapping from a MRMAP.RRF line.
Relationship from a MRREL.RRF line.
Attribute from a MRSAT.RRF line.
SemanticType from a MRSTY.RRF line.
RRFBrowserGUI.
FieldedStringTokenizer.nextToken() method,
except that its declared return value is Object
rather than String.
MetamorphoSysInputStream which are
file(s) in the "NLM data file" format.NLMFileMetamorphoSysInputStream.
DefaultTableModel that is not editable.NoEditTableModel.
NoEditTableModel with the specified data and
headers.
NoEditTableModel with the specified data and
headers.
NoEditTableModel with the specified data and row
count.
NoEditTableModel with the specified data and
headers.
NormalizedStringIndexEntryImpl
interface.NormalizedStringIndexEntryImpl.
NormalizedStringIndexEntryImpl from the specified
NormalizedStringIndexEntryImpl.
NormalizedWordIndexEntryImpl
interface.NormalizedWordIndexEntryImpl.
NormalizedWordIndexEntryImpl from the specified
NormalizedWordIndexEntryImpl.
ObjectXMLSerializer.
newInstance(String) method.JEditorPane,
JTree, and JTable using one page per sheet of paper.OnePagePrintable using the
specified JEditorPane and String title.
OnePagePrintable using the
specified JTable and String title.
OnePagePrintable using the
specified JTree and String title.
BrowsableInputStream.
RRFBrowsableInputStream.
OpenConfigAction.
OriginalMRFilesConceptInputStream.open(String[]).
File->Open Subset menu of the
RRFBrowserGUI.OpenSubsetAction.
OpenSubsetAction.
OriginalMRMetamorphoSysOutputStream.open(String).
RichMRMetamorphoSysOutputStream.open(String).
OriginalMRFilesConceptOutputStream.open(String).
OriginalMRMetathesaurusOutputStream.open(String).
RichMRFilesConceptOutputStream.open(String).
RichMRMetathesaurusOutputStream.open(String).
Map that uses two keys.HashMap that maintains the order in which elements were added.OrderedHashMap.
OrderedHashMap with the specified capacity.
OrderedHashMap with the specified capacity
and load factor.
OrderedHashMap from an existing Map.
List.
ConceptInputStream builds Concept objects from a full
set of original format MR files.OriginalMRFilesConceptInputStream.
ConceptOutputStream generates a subset of standard MR files.OriginalMRFilesConceptOutputStream.
MetamorphoSysInputStream containing Original Release
Format MR files in a directory.OriginalMRMetamorphoSysInputStream.
MetamorphoSysOutputStream that writes a directory
containing Original Release Format Metathesaurus files.OriginalMRMetamorphoSysOutputStream.
MetathesaurusInputStream builds
IndexEntrys, and ReleaseMetadata from a full set of standard
MR files.OriginalMRMetathesaurusInputStream;
MetathesaurusOutputStream generates standard MR files.OriginalMRMetathesaurusOutputStream.
OutputStreamRedoHandler.
OutputStreamUndoHandler.
Icon.
BlankIcon.
JDialog used to obtain a username and password from a user.PasswordDialog from the specified parameters.
Atom
interface.PlaceholderAtom.
PlaceholderAtom from the specified Atom.
Concept interface.PlaceholderConcept.
PrecedenceFilter.
HTMLDocument.
JEditorPane.
PlainDocument
JEditorPane.
JTable.
JTable.
Printable interface.
Printable interface.
PrintAction.
PrintPreviewAction from the specified info.
Exception to the
given BufferedWriter.
ProgressEvent from the specified information.
BufferedReader to provide the ability to
push a single line of input back onto the reader to read it again
on the next readLine() call.PushBackReader wrapped around the
specified reader.
PushBackReader wrapped around the
specified reader.
Object[] tuple onto the redo stack.
Object[] tuple onto the undo stack.
Map.
QualifierFrequency
interface.QualifierFrequency.
QualifierFrequency from the specified QualifierFrequency.
Atom that contains the given AUI.
Atom that
contains the given AUI.
Concept with the amount of
information specified by a ConceptDataSelector.
Concept that otherwise has just a
CUI value.
Concept with the amount of
information specified by a ConceptDataSelector.
Concept from the input stream and return it.
Concept containing data from the MR Files.
Concept containing data from the MR Files.
Concept from the input stream and return it.
Concept from the MR Files.
Concept containing data from the MR files.
IndexEntry from the input stream and return it.
IndexEntry from the input stream and return it.
IndexEntry from one of the index files.
IndexEntry from one of the index files.
BufferedReader.
RandomAccessFile using
the specified character set.
ReleaseMetadata containing data from the
BrowsableInputStream files.
ReleaseMetadata containing data from
MRSAB.RRF, MRCUI.RRF, MRAUI.RRF,
and MRDOC.RRF.
ReleaseMetadata from the input stream and return it.
ReleaseMetadata from the input stream and return it.
ReleaseMetadata containing data from
MRSAB, MRDOC and MRCUI.
ReleaseMetadata containing data from
MRSAB.RRF, MRCUI.RRF, MRAUI.RRF,
and MRDOC.RRF.
RedoAction.
Finder.
Finder.
Finder.
Finder.
Finder.
Finder.
Finders.
ConceptViews.
Finder.
Finder.
Atom.Concept.SourceIdentifierType.Concepts or two
Atoms.Relationship.RelationshipAttribute interface.RelationshipAttribute.
RelationshipAttribute.
Relationship
interface.Relationship.
Relationship from the specified Relationship.
RelationshipLabel.
ReleaseMetadata
interface.ReleaseMetadataImpl.
ReleaseMetadataImpl from the specified
ReleaseMetadataImpl.
String in the form
sab|type.
RelType.
RelType.
Restrictor from
the chain so it will not be applied.
Atom.
Atom and the
AtomAttributes attached to it.
Atom.
Atom.
Atom.
AtomMapping.
AtomMapping.
AtomAttribute.
Attribute.
AtomAttribute.
Attribute.
AtomAttribute.
Attribute.
RelationshipAttribute.
AtomAttribute.
RelationshipAttribute.
AttributeContext.
AttributeContext.
AttType from the data structure that
holds the list of attribute_types to be excluded.
AttributeValue.
AttributeValue.
RemoveByTermgroupFilter.
RemoveByTermgroupListSelectionListener
with the specified RemoveByTermgroupFilter and SortableJTable.
ComponentHistory.
ComponentHistory.
ComponentHistory.
ConceptMapping.
ConceptMapping.
Container from the list of Containers whose
font size will be managed.
Context.
Context.
Context.
Context.
Context.
Context.
Context.
ContextMember.
ContextMember.
ContextMember.
ContextMember.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
Coocurrence.
CoocurrenceContext.
CoocurrenceContext.
CutandPasteModeListener.
DataChangeListener.
DataChangeListener.
DataChangeListener.
DataChangeListener.
DataChangeListener.
DataChangeListener so that it will no longer be notified
every time a OriginalMRMetamorphoSysInputStream.fireDataChanged() call is made from this gui.
DataChangeListener so that it will no longer be notified
every time a OriginalMRMetamorphoSysOutputStream.fireDataChanged() call is made from this gui.
DataChangeListener so that it will no longer be notified
every time a RichMRMetamorphoSysInputStream.fireDataChanged() call is made from this gui.
DataChangeListener so that it will no longer be notified
every time a RichMRMetamorphoSysOutputStream.fireDataChanged() call is made from this gui.
Definition.
Definition.
Definition.
Definition.
Definition.
Definition.
Definition.
CutandPasteModeListener.
Color setting.
Language from the data structure that
holds the list of languages to be excluded.
Locator.
Locator.
Locator.
Locator.
Locator.
Locator.
Locator.
Mapping.
Mapping.
Mapping.
MetaDescription.
MetaDescription.
ProgressListener.
GUIConfigurable-specific property value.
QualifierFrequency.
QualifierFrequency.
Relationship.
Relationship.
Relationship.
Relationship and the
RelationshipAttributes attached to it.
Relationship.
Relationship.
Relationship.
SourceTermType from the list of removable termgroups.
SourceTermType on that row from the list of
removable SourceTermTypes.
Source will not have contexts
built from it.
Source from the data structure that holds the
list of selected sources.
SemanticType.
SemanticType.
SemanticType.
HierarchicalSemanticType from the data structure that
holds the list of semantic_types to be excluded.
Source on that row from the list of
Sources.
Source
and its Color setting.
SourceContext.
SourceContext.
SourceMetaDescription.
SourceMetaDescription.
Source
and its style setting.
StringAttribute.
StringAttribute.
StringContext.
StringContext.
HierarchicalSemanticType
and its Color setting.
HierarchicalSemanticType
and its style setting.
SourceTermType from the list of suppressible termgroups.
SourceTermType on that row from the
list of suppressible SourceTermTypes.
GUIConfigurable tab from the GUI.
TableSortListener
TermAttribute.
TermAttribute.
ConceptViews.ReportsManager.
false.
false.
XTabbedPane.
JPanel with a compound, titled border.
MRCXTBuilder state to default.
ConceptInputStream builds Concept objects from a
full set of "Rich Release Format" MR files.RichMRFilesConceptInputStream;
ConceptOutputStream generates a subset of
"Rich Release Format" MR files.RichMRFilesConceptOutputStream.
Concepts that contain given words.RichMRFilesIndexLookup from the
specified input directory.
Concept from a
full set of "Rich Release Format" MR files.RichMRFilesSingleConceptInputStream;
MetamorphoSysInputStream that reads content from a
directory containing Rich Release Format Metathesaurus files.RichMRMetamorphoSysInputStream.
MetamorphoSysOutputStream obtains data from the
MetamorphoSys subset routine and generates a subset of Rich Release
MR files.RichMRMetamorphoSysOutputStream.
ConceptInputStream builds objects from a full set of
"Rich Release Format" MR files.RichMRMetathesaurusInputStream;
MetathesaurusOutputStream generates MR files in the "Rich
Release Format".RichMRMetathesaurusOutputStream.
BrowsableInputStream.BrowserState to a new file.
BrowserState to the given File.
SaveConfigAction.
FileFilter class for JFileChooser to limit files to
.properties file extension.File.
PushBackReader to provide the ability to
find a single line of input, given a search string or pattern,
and to push it back onto the reader to read it again
on the next readLine() call.SearchStringPushBackReader from
the specified file and search pattern.
SearchStringPushBackReader from
the specified file and search pattern.
RandomAccessFile where the first
line of text starts with the search string.
GUIConfigurable.
Concept semantic type.SemanticTypes.SemanticTypeGroup.
SemanticType
interface.SemanticType.
SemanticType from the specified SemanticType.
BrowserRestrictor is required to have a no-arg constructor.
SemanticTypesToRemoveFilter, but
limits the functionality by removing the include/exclude toggle and
documentation.SemanticTypesBrowserRestrictorFilter
SemanticTypesToRemoveFilter.
SemanticTypesToRemoveJTable from the specified
SemanticTypesToRemoveFilter.
SemanticTypesToRemoveListSelectionListener from the
specified filter and table.
SemanticTypesToRemoveJTable table.
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabels are to be retrieved on
the Contexts, Mappings, or Relationships of the
Concept.
AdditionalRelationshipLabels are to be retrieved on
the Contexts, Mappings, or Relationships of the
Concept.
AdditionalRelationshipLabels of
the Contexts, Mappings, or Relationships of the
Concept.
AdditionalRelationshipLabels of
the Contexts, Mappings, or Relationships of the
Concept.
AttributeNames of the
Mappings or Attributes of the Concept.
AttributeNames of the
Mappings or Attributes of the Concept.
ColumnStatistics.
CoocurrenceTypes to select
Coocurrences of the Concept to retrieve.
CoocurrenceTypes to select
Coocurrences of the Concept to retrieve.
Languages when selecting
Atoms of the Concept to retrieve.
RelationshipLabels to select
Mappings or Relationships of the Concept to
retrieve.
RelationshipLabels to select
Mappings or Relationships of the Concept to
retrieve.
Concept from all
Sources.
Concept from all
Sources.
Suppressibles to select
Atoms, Attributes, Definitions, or
Relationships of the Concept to retrieve.
Suppressibles to select
Atoms, Attributes, Definitions, or
Relationships of the Concept to retrieve.
TermTypes which belong to a
TermTypeGroup to select Atoms of the Concept to
retrieve.
TermTypes to select Atoms
of the Concept to retrieve.
ApplicationConfiguration.
AttributeName (ATN).
AttributeName (ATN).
AttributeImpl.setAttributeName(AttributeName).
AttributeValueImpl.setAttributeName(AttributeName).
Atom to which this element is connected.
Atom for this AttributeContext.
Atom this AtomAttribute is connected to.
Atom this AtomCoocurrence is connected to.
Atom this Relationship is connected to.
Atom for this AttributeContext.
Atom this Context is connected to.
Atom this CoocurrenceGroup is connected to.
Atom related to this Definition.
Atom related to this Locator.
Atom this Relationship is connected to.
Atom this SourceContext is connected to.
StringContext.
Comparator that will be used to sort the Atoms.
Atom.
Atom.
AtomMappings.
AtomMappings.
AtomMappings.
AtomMappings.
Atoms of the Concept.
Concept.
Atoms with the
ones in the specified array.
Atoms with the
ones in the specified List.
Atoms with the
ones in the specified array.
Atoms with the
ones in the apecified List.
Atoms with the
ones in the specified array.
Atoms with the
ones in the specified List.
Atoms with those in the specified array.
Atoms with those in the specified List
Atoms with those in the specified array.
Atoms with those in the specified List
AttributeContexts with the ones in the specified array.
AttributeContexts with the ones in the specified List.
AttributeContexts with the ones in the specified array.
AttributeContexts with the ones in the specified List.
AttributeName (ATN).
AttributeName (ATN).
AttributeName (ATN).
AttributeName (ATN).
AttributeName (MAPATN).
AttributeName (MAPATN).
AttributeNames are to be retrieved on the
Mappings or Attributes of the Concept.
AttributeNames are to be retrieved on the
Mappings or Attributes of the Concept.
Attributes of the
Concept.
Attributes of the
Concept.
AtomAttributes with the ones in the specified array.
AtomAttributes with the ones in the specified List.
Attributes with the ones in the specified array.
Attributes with the ones in the specified List.
AtomAttributes with the ones in the specified array.
AtomAttributes with the ones in the specified List.
Attributes with the ones in the specified array.
Attributes with the ones in the specified List.
AtomAttributes with the ones in the specified array.
AtomAttributes with the ones in the specified List.
Attributes with the ones in the specified array.
Attributes with the ones in the specified List.
RelationshipAttributes with the ones in the specified array.
RelationshipAttributes with the ones in the specified List.
AtomAttributes with the ones in the specified array.
AtomAttributes with the ones in the specified List.
RelationshipAttributes with the ones in the specified array.
RelationshipAttributes with the ones in the specified List.
List of AttTypes to be removed
with the one provided.
AttributeValues with the ones in the specified array.
AttributeValues with the ones in the specified List.
AttributeValues with the ones in the specified array.
AttributeValues with the ones in the specified List.
AttributeImpl.setAttributeIdentifier(String).
AttributeValueImpl.setAttributeIdentifier(String).
DefinitionImpl.setAttributeIdentifier(String).
LocatorImpl.setAttributeIdentifier(String).
SemanticTypeImpl.setAttributeIdentifier(String).
AttributeImpl.setAttributeValue(String).
AttributeValueImpl.setAttributeValue(String).
Atom.setAtomIdentifier(String).
PlaceholderAtom.setAtomIdentifier(String).
SmallPlaceholderAtom.setAtomIdentifier(String).
AtomMappingImpl.setAtomIdentifier(String).
AtomMappingImpl.setRelatedAtomIdentifier(String).
BrowsableInputStream.
BrowsableInputStream.
BrowsableInputStream that provides values to the
filter.
BrowsableInputStream.
BrowsableInputStream.
BrowserRestrictor.
BrowserRestrictor on all Finders.
BrowserRestrictor on all ConceptViews.
BrowserRestrictor and propogates its selection
to all the finders and reports.
CoocurrenceImpl.setCoocurrenceAttribute(String).
CoocurrenceContextImpl.setCoocurrenceContextFrequency(int).
CoocurrenceImpl.setCoocurrenceFrequency(int).
Comparator to be used for the sort order.
ComponentHistorys of the
Concept.
ComponentHistorys with the ones in the specified array.
ComponentHistorys with the ones in the specified List.
ComponentHistorys with the ones in the specified array.
ComponentHistorys with the ones in the specified List.
ComponentHistorys with the ones in the specified array.
ComponentHistorys with the ones in the specified List.
Concept to be displayed.
Concept to be displayed.
Concept to be displayed.
Concept for display in the ReportsManager's
chosen ContentView panel.
Concept that holds this ConceptElement.
Concept that holds this Attribute.
Concept that holds this ComponentHistory.
Concept that holds this ContextGroup.
Concept that holds this Context
Concept that holds this CoocurrenceGroup.
Concept that holds this Coocurrence.
Concept that holds this Definition.
Concept that holds this Locator.
Concept that holds this Mapping (CUI).
Concept that holds this Atom.
Concept that holds this Relationship.
Concept that holds this SemanticType.
Concept that holds this Atom.
Concept that holds this TermAttribute.
Concept that holds this Term.
Concept.
Concept
that holds this Concept.
Concept
that holds this Concept.
ConceptList.
ConceptListManager.
ConceptListManager.
ConceptListManager.
ConceptListManager.
ConceptListManager for the RRFBrowserGUI.
ConceptListManager.
ConceptMappings.
ConceptMappings.
ConceptMappings.
ConceptMappings.
UserConfiguration.
UserConfiguration.
ApplicationConfiguration.
ApplicationConfiguration.
ApplicationConfiguration.
UserConfiguration.
ApplicationConfiguration used for the default settings.
UserConfiguration.
ApplicationConfiguration used for default settings.
UserConfiguration.
ApplicationConfiguration representing the default state.
UserConfiguration.
ApplicationConfiguration.
JEditorPane.
ContentView definition for this ConceptElement (CVF).
ContentView definition for this Attribute (CVF).
ContentView definition for this AttributeValue (CVF).
ContentView definition for this Locator (CVF).
ContentView definition for this Context (CVF).
ContentView definition for this CoocurrenceContext (CVF).
ContentView definition for this Coocurrence (CVF).
ContentView definition for this Definition (CVF).
ContentView definition for this Locator (CVF).
ContentView definition for this Mapping (CVF).
ContentView definition for this Atom (CVF).
ContentView definition for this Relationship (CVF).
ContentView definition for this SemanticType (CVF).
ContentView definition for this Atom (CVF).
ContentView definition for this SourceContext (CVF).
ContextGroup that holds this StringContext.
ContextGroup that holds this StringContext.
ContextMembers with the ones in the specified array.
ContextMembers with the ones in the specified List.
ContextMembers with the ones in the specified array.
ContextMembers with the ones in the specified List.
ContextMembers with the ones in the specified array.
ContextMembers with the ones in the specified List.
ContextMembers with the ones in the specified array.
ContextMembers with the ones in the specified List.
Contexts of the
Concept.
Contexts of the
Concept.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
Contexts with the ones in the specified array.
Contexts with the ones in the specified List.
CoocurrenceContexts with those in the
specified array.
CoocurrenceContexts with those in the
specified List
CoocurrenceContexts with those in the
specified array.
CoocurrenceContexts with those in the
specified List
CoocurrenceGroup that holds this CoocurrenceContext.
CoocurrenceGroup that holds this CoocurrenceContext.
Coocurrences of the
Concept.
Coocurrences of the
Concept.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
Coocurrences with the ones in the specified array.
Coocurrences with the ones in the specified List.
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceTypes are to be used to select
Coocurrences of the Concept.
CoocurrenceTypes are to be used to select
Coocurrences of the Concept.
CoocurrenceType (COT).
CoocurrenceType (COT).
CoocurrenceContextImpl.setCoocurrenceType(CoocurrenceType).
CoocurrenceImpl.setCoocurrenceType(CoocurrenceType).
Concept.
ConceptImpl.setConceptIdentifier(String).
PlaceholderConcept.setConceptIdentifier(String).
ConceptMappingImpl.setConceptIdentifier(String).
AtomMappingImpl.setRelatedConceptIdentifier(String).
ConceptMappingImpl.setRelativeConceptIdentifier(String).
CuiList reference.
CuiList reference.
Concept.
ContentView definition for this ConceptElement (CVF).
AttributeImpl.setContentView(ContentView).
AttributeValueImpl.setContentView(ContentView).
ComponentHistoryImpl.setContentView(ContentView).
ContextImpl.setContentView(ContentView).
CoocurrenceContextImpl.setContentView(ContentView).
CoocurrenceImpl.setContentView(ContentView).
DefinitionImpl.setContentView(ContentView).
LocatorImpl.setContentView(ContentView).
MappingImpl.setContentView(ContentView).
PlaceholderAtom.setContentView(ContentView).
RelationshipImpl.setContentView(ContentView).
SemanticTypeImpl.setContentView(ContentView).
SmallPlaceholderAtom.setContentView(ContentView).
SourceContextImpl.setContentView(ContentView).
ContextMember (CXL).
ContextMemberImpl.setLabel(String).
ContextImpl.setContextNumber(int).
SourceContextImpl.setContextNumber(int).
DefinitionImpl.setDefinition(String).
Definitions of the
Concept.
Definitions of the
Concept.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Definitions with the ones in the specified array.
Definitions with the ones in the specified List.
Source.
DefaultSubset.
JDialog for the handler.
FindDialog for the handler.
BrowsableInputStream.
RRFBrowsableInputStream.
Map of directories to their ConceptLists.
HTMLDocument as the document to print.
JEditorPane.
PlainDocument as the Document to print.
JEditorPane.
ConceptView.
Concept after filtering.
Finders.
Finders.
ConceptView.
Finder.
ConceptView.
Finder.
Finders of the font family
to be used for text display.
ConceptViews of the font family
to be used for text display.
ConceptView.
Finder.
ConceptView.
Finder.
Finders of the font point size
to be used for text display.
ConceptViews of the font point size to be used
for text display.
LocatorImpl.setFrequency(int).
MapObject.
MapObject.
MRCXTBuilderGUI.
MetamorphoSysGUI.
FinderHandler that will execute the find operation.
ContextMember has a child.
ContextMember has a child.
ContextImpl.setHierarchicalCode(String).
ContextMemberImpl.setHierarchicalCode(String).
DefaultSubset.
ContentViewFilter.ContentViewOption.
ListSelectionEvents
ListSelectionEvents
ListSelectionEvents.
ListSelectionEvents
ListSelectionEvents
ListSelectionEvents.
ListSelectionEvents.
ListSelectionEvents.
ListSelectionEvents.
ChangeEvents.
AtomMapping is in the current subset (MAPIN).
ConceptMapping is in the current subset (MAPIN).
AtomMapping
is in the current subset (MAPIN).
ConceptMapping
is in the current subset (MAPIN).
ConceptInputStream to be used during
subsetting and instantiates it.
WelcomeGUI.
Relationship.
Relationship.
Atom
is preferred (ISPREF).
Atom is
preferred (ISPREF).
Atom is
preferred (ISPREF).
ContextMember.
ContextMember.
Language of the index that will be searched.
Language (LAT).
Language (LAT).
Language (LAT).
Language (LAT).
Language (LAT).
Languages are to be used to select which Atoms
of the Concept are to be retrieved.
Language (LAT).
PlaceholderAtom.setLanguage(Language).
SmallPlaceholderAtom.setLanguage(Language).
TermImpl.setLanguage(Language).
Language (LAT).
File that contains the lexicon data.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
Locators with the ones in the specified array.
Locators with the ones in the specified List.
String being indexed
PlaceholderAtom.setTermIdentifier(String).
SmallPlaceholderAtom.setTermIdentifier(String).
TermAttributeImpl.setTermIdentifier(String).
TermImpl.setTermIdentifier(String).
Mappings of the
Concept.
Mappings with the ones in the specified array.
Mappings with the ones in the specified List.
Mappings with the ones in the specified array.
Mappings with the ones in the specified List.
Mappings with the ones in the specified array.
Mappings with the ones in the specified List.
AtomMapping (MAPREASON).
ConceptMapping (MAPREASON).
AtomMapping (MAPREASON).
ConceptMapping (MAPREASON).
MetaDescription in the current subset.
MetaDescriptions in the current subset.
MetaDescription in the current subset.
MetaDescriptions in the current subset.
File for the MetamorphoSys "config" directory
to use.
File that contains the MetamorphoSys application.
File that contains the Metathesaurus data.
DefaultSubset.
String being indexed
String being indexed
ConceptOutputStream to be used during subsetting and
instantiates it.
URL to display.
ContextImpl.setParentAtomIdentifier(String).
SourceContextImpl.setParentAtomIdentifier(String).
JPopupMenu.
List ranking
the SourceTermTypes according to precedence.
List of all SourceTermType objects in the
precedence order.
Printable to preview.
JEditorPane.
JTable.
JTable.
true indicating that the producer is finished
adding Concepts.
true indicating that the producer is finished
adding IndexEntrys.
JProgressBar to be visible or not.
Properties representing the configuration choices.
Properties representing the configuration choices.
Properties representing the configuration choices.
Properties representing the configuration choices.
Properties representing the configuration choices.
GUIConfigurable with all properties specific to
the Finder.
Properties representing the configuration choices.
MRCXTBuilder from a Properties
object.
Properties specific to the filter.
Properties object.
Properties
object.
Properties
object.
Properties
object.
Properties
object.
Properties corresponding to the specified
Configurable.
ContextImpl.setPathToRoot(String).
SourceContextImpl.setPathToRoot(String).
QualifierFrequency values with those in the
specified array.
QualifierFrequency values with those in the
specified List
QualifierFrequency values with those in the
specified array.
QualifierFrequency values with those in the
specified List
QualifierFrequency values with those in the
specified array.
QualifierFrequency values with those in the
specified List
QualifierFrequency values with those in the
specified array.
QualifierFrequency values with those in the
specified List
ConceptMapping.
ConceptMapping.
Locator
in the actual information source.
Locator
in the actual information source.
AtomMappingImpl.setRelationshipLabel(RelationshipLabel).
ConceptMappingImpl.setRelationship(RelationshipLabel).
MappingImpl.setRelationshipName(RelationshipLabel).
RelationshipImpl.setRelationshipLabel(RelationshipLabel).
RelationshipLabel (REL).
RelationshipLabel (REL).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AdditionalRelationshipLabel (RELA) from the context member to its parent.
AtomMappingImpl.setAdditionalRelationshipLabel(AdditionalRelationshipLabel).
ConceptMappingImpl.setAdditionalRelationshipLabel(AdditionalRelationshipLabel).
ContextImpl.setAdditionalRelationshipLabel(AdditionalRelationshipLabel).
ContextMemberImpl.setAdditionalRelationshipLabel(AdditionalRelationshipLabel).
MappingImpl.setAdditionalRelationshipLabel(AdditionalRelationshipLabel).
RelationshipImpl.setAdditionalRelationshipLabel(AdditionalRelationshipLabel).
AdditionalRelationshipLabel (RELA).
AdditionalRelationshipLabel (RELA).
Atom involved.
Atom to which this element is related.
Concept to which this element is related.
SourceIdentifierType to which this element is connected.
SourceIdentifierType to which this element is connected.
Relationship this RelationshipAttribute is connected to.
Relationship to which this element is connected.
Relationship.
Relationship.
RelationshipLabel (REL).
RelationshipLabel (REL).
RelationshipLabels are used to select Mappings
or Relationships of the Concept to be retrieved.
RelationshipLabels are used to select Mappings
or Relationships of the Concept to be retrieved.
RelationshipLabel (REL).
RelationshipLabel (REL).
Relationships of the
Concept.
Relationships of the
Concept.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
Relationships with the ones in the specified array.
Relationships of the ones in the specified List.
RelTypes to exclude with
the one provided.
Date.
Date.
ReportsManager.
Restrictor that will be used to restrict the parts of the
Concept that will be displayed in this ConceptView.
RelationshipImpl.getRelationshipGroup().
RelationshipImpl.setRelationshipIdentifier(String).
Relationship.setRelationshipIdentifier(String).
AttributeElement.setSourceAttributeIdentifier(String).
AttributeImpl.setSourceAttributeIdentifier(String).
AttributeValueImpl.setSourceAttributeIdentifier(String).
DefinitionImpl.setSourceAttributeIdentifier(String).
LocatorImpl.setSourceAttributeIdentifier(String).
Atom.
PlaceholderAtom.setSourceAtomIdentifier(String).
SmallPlaceholderAtom.setSourceAtomIdentifier(String).
PlaceholderAtom.setSourceConceptIdentifier(String).
SmallPlaceholderAtom.setSourceConceptIdentifier(String).
PlaceholderAtom.setSourceDescriptor(String).
SmallPlaceholderAtom.setSourceDescriptor(String).
SearchOptions which provides the ability to
highlight or hide content in a concept view based on criteria.
SearchOptions which provides the ability to
highlight or hide content in a concept view based on criteria.
SearchOptions which provides the ability to
highlight or hide content in a concept view based on criteria.
SearchOptions that will be used
to restrict finder searches to content matching the criteria.
DefaultSubset.
Set of Sources that are selected
for inclusion in the built MRCXT.RRF
SortableJTable
based on the attribute_types_to_remove data structure in the
AttributeTypesToRemoveFilter.
SortableJTable
based on the relationship_types_to_remove data structure in the
RelationshipTypesToRemoveFilter.
SortableJTable
based on the removable_termgroups data structure in the
RemoveByTermgroupFilter.
SemanticTypesToRemoveJTable
SemanticTypesToRemoveJTable based on the
semantic types data structure in the SemanticTypesToRemoveFilter.
Sources.
SourcesToRemoveJTable based on the
sources_to_remove data structure in the SourcesToRemoveFilter.
File that contains the semantic network data.
HierarchicalSemanticType (STY).
HierarchicalSemanticType (STY).
SemanticTypes of the
Concept.
SemanticTypes with the ones in the specified array.
SemanticTypes with the ones in the specified List.
SemanticTypes with the ones in the specified array.
SemanticTypes with the ones in the specified List.
SemanticTypes with the ones in the specified array.
SemanticTypes with the ones in the specified List.
List of HierarchicalSemanticTypes to exclude.
RelationshipImpl.setSourceOfLabel(Source).
LocatorImpl.setExternalName(String).
DisplayableConcept.
DisplayableConcept.
LocatorImpl.setRecordIdentifier(String).
Locator
in the actual information source.
Source being depended upon.
Source value of the attribute type.
Source of the RelType.
AttributeContext.
Attribute.
ComponentHistory.
Context.
CoocurrenceContext.
Coocurrence.
Definition.
Locator.
MapObject.
Source.
Atom.
Relationship.
Atom.
StringContext.
SourceElement.
Source.
Atom.
Atom.
Atom.
SourceContexts with the ones in the specified array.
SourceContexts with the ones in the specified List.
SourceContexts with the ones in the specified array.
SourceContexts with the ones in the specified List.
Dependency(s) with the one
given.
File where the MRHIER.RRF will be found and the
MRCXT.RRF should be written.
SourceIdentifierType for this AttributeContext.
SourceIdentifierType for this AttributeContext.
SourceIdentifierType to which this element is connected.
SourceIdentifierType to which this element is connected.
SourceIdentifierType to which this element is connected.
Source[]
Sources.
SourceMetaDescription in the current subset.
SourceMetaDescriptions in the current subset.
SourceMetaDescription in the current subset.
SourceMetaDescriptions in the current subset.
Sources from which elements of the Concept are to be
retrieved.
Sources from which elements of the Concept are to be
retrieved.
SourceTermTypes in rank order.
SourceTermTypes in rank order.
SourceTermTypes in rank order.
SourceTermTypes in rank order.
RelationshipImpl.setSourceRelationshipIdentifier(String).
PlaceholderAtom.setName(String).
SmallPlaceholderAtom.setName(String).
StringInfoImpl.setName(String).
TermImpl.setName(String).
StringAttribute that holds this AttributeContext.
StringAttribute that holds this AttributeContext.
StringAttributes with the ones in the specified array.
StringAttributes with the ones in the specified List.
StringAttributes with the ones in the specified array.
StringAttributes with the ones in the specified List.
StringContext that holds this SourceContext.
StringContext that holds this SourceContext.
StringContexts with the ones in the specified array.
StringContexts with the ones in the specified List.
StringContexts with the ones in the specified array.
StringContexts with the ones in the specified List.
StringInfo.
StringInfo.
StringInfo.
StringInfo.
StringType (STT).
StringType (STT).
StringType (STT).
StringType (STT).
StringType (STT).
StringType (STT).
PlaceholderAtom.setStringType(StringType).
SmallPlaceholderAtom.setStringType(StringType).
StringInfoImpl.setStringType(StringType).
StringType (STT).
SemanticTypeImpl.setSemanticType(HierarchicalSemanticType).
HierarchicalSemanticType (STY).
MappingImpl.setSubsetIdentifier(String).
LocatorImpl.setStringIdentifier(String).
PlaceholderAtom.setStringIdentifier(String).
SmallPlaceholderAtom.setStringIdentifier(String).
StringInfoImpl.setStringIdentifier(String).
Suppressibles are used to select Atoms,
Attributes, Definitions, or Relationships of the
Concept to be retrieved.
Suppressibles are used to select Atoms,
Attributes, Definitions, or Relationships of the
Concept to be retrieved.
ComponentHistoryImpl.setVersion(String).
Term.
Term to which this TermAttribute refers.
Term to which this element is connected.
TermAttribute that holds this StringAttribute.
TermAttribute that holds this StringAttribute.
TermAttributes with the specified TermAttribute objects.
TermAttributes with the specified List
TermAttributes with the specified TermAttribute objects.
TermAttributes with the specified List
TermStatus (TS).
TermStatus (TS).
TermStatus (TS).
TermStatus (TS).
TermStatus (TS).
TermType (TTY).
TermType (TTY).
TermType (TTY).
TermType.
TermTypeGroups and therefore which TermTypes are
to be used to select Atoms of the Concept to retrieve.
TermTypes are used to select Atoms of the
Concept to retrieve.
StringInfo objects.
List
StringInfo objects.
List
MapObject.
MapObject.
TermStatus (TS).
PlaceholderAtom.setTermStatus(TermStatus).
SmallPlaceholderAtom.setTermStatus(TermStatus).
TermImpl.setTermStatus(TermStatus).
TermStatus (TS).
TermType (TTY).
PlaceholderAtom.setTermType(TermType).
SmallPlaceholderAtom.setTermType(TermType).
RelType.
ComponentHistoryImpl.setIdentifier(String).
File directory that contains the Metathesaurus data.
LocatorImpl.setFrequencyMeaning(String).
Concept before filtering.
UserConfiguration.
List of user suppressed SourceTermType objects.
String being indexed
String being indexed
ConceptMappingImpl.setLastReleaseVersion(String)
BrowserRestrictor which doesn't restrict at all.MultiLineInputDialog to the user.
ListDialog containing a list of choices.
ListDialog containing a list of choices.
ListDialog containing a list of choices.
Atom
interface.PlaceholderAtom.
PlaceholderAtom from the specified Atom.
Comparator.
Comparator and
optionally sort uniquely.
Comparator and
optionally sort uniquely.
JTable that supports sorting of columns.SortableJTable.
SortableJTable from the specified model.
TableCellRenderer for use as s column header in a SortableJTable.SortButtonRenderer
Sets the current icon to BlankIcon until
the user chooses to sort a column.
Source.
BrowserRestrictor is required to have a no-arg constructor.
SourcesToRemoveFilter, but
limits the functionality by removing the include/exclude toggle and
related documentation.SourceContext interface.SourceContext.
SourceContext from the specified SourceContext.
Source.Source.SourceIdentifierType.MapObject's
expression.SourceIdentifierType.
SourceMetaDescription interface.SourceMetaDescriptionImpl.
SourceMetaDescription with the fields
from a MRSAB row.
SourcesToRemoveEvent.
SourcesToRemoveFilter.
ApplicationConfiguration and a
SourcesToRemoveFilter.
Source and a TermType.SourceTermType.
String[] of the tokens.
StringAttribute interface.StringAttribute.
StringAttribute from the specified StringAttribute.
SourceContexts which share
the same Source abbreviation and code.StringContext interface.StringContext.
StringContext from the specified StringContext.
Term.StringInfo interface.StringInfo.
StringInfo from the specified StringInfo.
StringType.
String classes do not have a valueOf(String) method,
this method takes its place in reconstructing primitive values.
STYMetaDescription interface.STYMetaDescriptionImpl.
STYMetaDescription from a row from the SRDEF file.
Concept.
Source is in current version.
SuiCountIndexBuilder.
JEditorPane with explicitly defined key bindings.JList with a key listener and other extras.SuperJList.
SuperJList from the specified data.
Suppressible.
SuppressibleTermgroupsFilter.
SuppressibleTermgroupsListSelectionListener with the
specified SuppressibleTermgroupsFilter and SortableJTable.
SuppressibleTermgroupsOptionsGUI connected to the
specified SuppressibleTermgroupsFilter.
SwingToolkit.TableModels.TableSorter.
TableSorter with the specified model.
SortableJTable to inform users of the
table that a sort is taking place.TableSortEvent.
SortableJTable TableSortEvents.Concept term information.Term.TermAttribute interface.TermAttribute.
TermAttribute from the specified TermAttribute.
Term.Term interface.Term.
Term from the specified Term.
TermStatus.
TermType.
TermTypes.TermTypeGroup.
long representing a time to
a string representing hours, minutes, and seconds.
[] to a hex string.
BrowserRestrictor.
String representation of the concept based on the
prefererd name.
String representation of the dependency.
AttType that includes
the two fields that make the AttType unique.
String representation of the RelType
that includes the two fields that make the RelType unique.
Object consisting
of its subkey.
Comparator.
String representation.
String representation of the index entry.
Finder that enables user to choose concepts for display
from an HTML document formatted to look like a tree.TreeBrowserFinder.
JPopupMenu.TreeBrowserFinder.JEditorPane using two pages
per sheet of paper.TwoPagePrintable using the
specified JEditorPane and String title.
UndoAction.
UserConfiguration from the specified properties
File.
UserConfiguration from the specified
Properties.
InputStreamReader that ignores the first 3 bytes if they
are the UTF8 Byte Order Mark (BOM) bytes.UTF8InputStreamReader.
OutputStreamWriter that can make the first 3 bytes
the UTF8 Byte Order Mark (BOM) bytes.UTF8OutputStreamWriter.
UTF8OutputStreamWriter.
GUIConfigurable is valid.
GUIConfigurable is valid.
GUIConfigurable is valid.
GUIConfigurable is valid.
File->Validate menu of the WelcomeGUI.ValidateDistributionAction.
GUIConfigurables are in valid states.
ListSelectionEvent and responds
by going through logic to determine if other AttType
rows should be selected as well.
ListSelectionEvent and responds
by going through logic to determine if other relationship type rows should
be selected as well.
ListSelectionEvents.
ListSelectionEvent and responds by going
through logic to determine if related sources should be selected as well.
Version class aggregates change information
for the gov.nih.nlm.mms.browser package.Version class aggregates change information
for the gov.nih.nlm.mms.cxt package.Version class aggregates change information
for the gov.nih.nlm.mms.filters package.Version class aggregates change information
for the gov.nih.nlm.mms package.Version class aggregates change information
for the gov.nih.nlm.swing package.Version class aggregates change information
for the gov.nih.nlm.umls.io package.Version class aggregates change information
for the gov.nih.nlm.umls.meta.impl package.Version class aggregates change information
for the gov.nih.nlm.umls.meta package.Version class aggregates change information
for the gov.nih.nlm.umls package.Version class aggregates change information
for the gov.nih.nlm.util package.Concepts via word searches.WordSearchFinder.
BackwardAction.
ForwardAction.
WordSearchFinder.OptionsGUI dialog.WordSearchFinder.Options
model with an observer being passed to it.
WordSearchFinder.WordSearchFinder.OptionsGUI dialog.
JPopupMenu.WordSearchFinder.OptionsGUI.WordSearchResult
Concept to the output stream.
Concept to the output stream.
Concept to the appropriate MR files.
Concept.
Concept to the appropriate MR files.
Concept to the appropriate MR files.
BrowserState to file so that history and
settings can be reset on future runs of the application.
MRFILES.RRF and MRCOLS.RRF files themselves.
MRFILES.RRF and MRCOLS.RRF files themselves.
IndexEntry to the output stream.
IndexEntry to the output stream.
IndexEntry to the appropriate MR index file.
IndexEntry to the appropriate MR index file.
MRAUI.RRF file.
MRCOC.RRF entries for a Concept
MRCON entries for a Concept
MRCONSO.RRF entries for a Concept.
MRCONSO.RRF entries for a Concept
ReleaseMetadata to MRCUI.
MRCUI.RRF file.
Concept.
Concept.
MRCXT entries for a Concept
MRCXT.RRF entries for a Concept
Concept.
Concept.
MRDEF entries for a Concept
MRDEF.RRF entries for a Concept
MRDOC.RRF file, ensuring no
duplicates.
MRDOC.RRF file.
MRHIER entries for a Concept
MRHIST.RRF entries for a Concept
MRMAP.RRF entries for a Concept
MRRANK.
MRRANK.RRF file.
MRREL.RRF entries for a Concept
MRSAB.
MRSAB.RRF file.
Concept.
Concept.
MRSAT entries for a Concept
MRSAT.RRF entries for a Concept
MRSMAP.RRF entries for a Concept
MRSO entries for a Concept
MRSTY.RRF entries for a Concept
release.dat.
ReleaseMetadata to the output stream.
ReleaseMetadata to the output stream.
ReleaseMetadata to the appropriate MR metadata files.
ReleaseMetadata to the appropriate MR metadata files.
JTabbedPane and enables the dragging and dropping of the tabs
to reorder them.
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