gov.nih.nlm.mms
Class ConceptRanker

java.lang.Object
  gov.nih.nlm.mms.ConceptRanker

public class ConceptRanker
extends Object

Constructor Summary

ConceptRanker()

Method Summary

protected Map	assignLrl(Atom[] atoms) Assigns the LRL value.
String	getNullValue() Returns the null value.
boolean	isEmptyValue(String token) Indicates whether or not the specified token is null or contains a null value as defined by being either zero length or a value equal to the null value.
protected boolean	isLuiSuppressible(String lui, Atom[] atoms) Returns true if the specified LUI is suppressible.
static void	main(String[] args)
void	transform(String dir, boolean rich_input, boolean rich_output)
protected void	writeMRCON(Concept concept, PrintWriter out) Writes MRCON entries for a Concept
protected void	writeMRCONSO(Concept concept, PrintWriter out) Writes MRCONSO.RRF entries for a Concept
protected void	writeMRSO(Concept concept, PrintWriter out) Writes MRSO entries for a Concept

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ConceptRanker

public ConceptRanker()

Method Detail

transform

public void transform(String dir,
                      boolean rich_input,
                      boolean rich_output)
               throws Exception

Throws:

Exception

writeMRCONSO

protected void writeMRCONSO(Concept concept,
                            PrintWriter out)
                     throws IOException

Writes MRCONSO.RRF entries for a Concept

Parameters:

concept - the Concept to write

Throws:

IOException - if anything goes wrong

writeMRSO

protected void writeMRSO(Concept concept,
                         PrintWriter out)
                  throws IOException

Writes MRSO entries for a Concept

Parameters:

concept - the Concept to write

Throws:

IOException - if anything goes wrong

writeMRCON

protected void writeMRCON(Concept concept,
                          PrintWriter out)
                   throws IOException

Writes MRCON entries for a Concept

Parameters:

concept - the Concept to write

Throws:

IOException - if anything goes wrong

isLuiSuppressible

protected boolean isLuiSuppressible(String lui,
                                    Atom[] atoms)

Returns true if the specified LUI is suppressible.

Parameters:

lui - the LUI value to check

atoms - the Atoms

Returns:

true if the LUI is suppressible, false otherwise

assignLrl

protected Map assignLrl(Atom[] atoms)

Assigns the LRL value.

Parameters:

atoms - the Atoms to be assigned

Returns:

Map of cui:sui tuple mapped to lrl

isEmptyValue

public boolean isEmptyValue(String token)

Indicates whether or not the specified token is null or contains a null value as defined by being either zero length or a value equal to the null value.

getNullValue

public String getNullValue()

Returns the null value. This is needed if release.dat specifies some non-standard null value char sequence.

main

public static void main(String[] args)